Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02156 ATGGAAGAGAGTTTCGTTTGCCAGTGGAGCGATATCAGATCTCTCTTGTCCATCCTTCAGTGGTGGGCTTTCAATGTCACCGTAATCATCGTCAACAAGTGGATCTTCCAGAAATTGGATTTCAAGTTTCCCCTATCAGTTTCATGCGTCCACTTTATCTGTTCAGCCATTGGGGGATATGTGGTTATAAAGGTGCTGAAACTTAAGCCACTGATAACTGTTGACCCTGAAGATCGCTGGCGAAGAATCTTTCCAATGTCATTTGTGTTCTGTATTAACATCGTGTTGGGGAATGTGAGCCTACGATACATTCCAGTTTCTTTTATGCAGACAATAAAGTCATTCACACCTGCCACCACAGTTGTTTTGCAATGGCTAGTGTGGAGGAAGTATTTTGACTGGCGTATTTGGGCTTCTCTTGTACCCATTGTTGGAGGGATTCTTCTGACATCTGTAACAGAGCTTAGTTTTAACATGTTTGGATTTTGTGCTGCATTATTTGGCTGTCTGGCTACTTCTACAAAGACTATTCTTGCAGAATCTCTTCTGCATGGATACAAATTTGACAGCATAAACACAGTTTATTACATGGCACCTTTTGCAACCATGATCTTGGCGCTTCCTGCAGTGTTACTCGAAGGCAATGGAATCCTTGAATGGTTTGGTACCCATCCATATCCTTGGTCGGCTCTCATCATTATTTTTAGCTCCGGGGTGTTGGCTTTCTGTCTTAACTTCTCAATTTTTTACGTGATTCACTCCACCACTGCTGTGACATTTAATGTTGCCGGAAATCTTAAGGTTGCTGTTGCTGTCCTTGTTTCTTGGCTGATATTTAGAAACCCAATTTCATATTTAAATTCTGTTGGATGTGCCGTGACTCTTGTGGGCTGTACATTCTATGGTTATGTGAGGCACATGCTCTCCCAACAGCCAGCAGTCCCTGGAACTCCTCGGACCCCCAGGACTCCAAGGACCCCCCGGAGTAAGATGGAGTTGCTTCCTCTTGTAAATGATAAATTAGAAGATAAGGTCTAG 1038 0.4316 MEESFVCQWSDIRSLLSILQWWAFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSAIGGYVVIKVLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILALPAVLLEGNGILEWFGTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYLNSVGCAVTLVGCTFYGYVRHMLSQQPAVPGTPRTPRTPRTPRSKMELLPLVNDKLEDKV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02156 345 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
Vimu10g02156 345 PANTHER SOLUTE CARRIER FAMILY 35 15 305 - -
Vimu10g02156 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 68 152 - -
Vimu10g02156 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02156 Vimu-Chr10 31748959 31753149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02156 1 345 Organic Solute Cotransporters AT1G77610 89.306 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02156 K26222 - gmx:100778350 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02156 10 31748959 31753149 Vimu10g02156 10 31748959 31753149 ECH