Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02139 ATGGCCATAGCTGGTAATATGGACAATCAACCCTCTACAAATGAGGAGGAAGTAGGTAAACAAATACTGCAATATGAAAAATCTGCGGCTGGTATCTTGTGTGAGCTGAAGATTCGTCATGGAGCTCAAACTTCTGATCTAACATCGACAAAGGACATTGTGGGTATTGTTGCTACATTGGGAAAAGTTGAGGATGACCATCTTAGCAGGGAAGATATTGACGTAAGATTCCCCCGACCAGAAAGATCAATGGAGCCTGATAACCATCACGGTGAAATTGCCAGACAGTTGAAGGAAGTCAAATGGAAGAAAGAAAAGATTATGGAGGAATTAAAAAGGGAGCAGGCGTTGTTGGACATGACAAGGCTCAATTTCAACAAAAAGAAGGGTGATTATCTTAGGTATTTGGCACAAAGGTCCTCAAATGCAACTAAGGTAATCTATGTGGAAGTTGGATATGTAATTCTAGGGGATTTATTCATATGCTGTTCTGATCTCACGCAAGTCATTTTGATTGTTTTAGAACGGTTTAAGTTGTTTCTATTAAGGATATGTTTTGACATGAACTTTTAG 573 0.3909 MAIAGNMDNQPSTNEEEVGKQILQYEKSAAGILCELKIRHGAQTSDLTSTKDIVGIVATLGKVEDDHLSREDIDVRFPRPERSMEPDNHHGEIARQLKEVKWKKEKIMEELKREQALLDMTRLNFNKKKGDYLRYLAQRSSNATKVIYVEVGYVILGDLFICCSDLTQVILIVLERFKLFLLRICFDMNF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02139 190 Coils Coil 94 117 - -
Vimu10g02139 190 PANTHER EN/SPM-LIKE TRANSPOSON-RELATED 10 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02139 Vimu-Chr10 31396221 31400930 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02139 - - var:108332210 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02139 10 31396221 31400930 Vimu10g02139 10 31396221 31400930 ECH