Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02127 ATGGAGGACTTGCCGTTGCCAGCGCTCTTCGAGCAAACGCGCAAGATCCACGCCGACGCCACCGAGTCCGCCGTCGACCAGGAGGTTGTGAAGAAGGGGTGCCAGGCCCTGCATAGATGCGAGGACATGGTGAATAATCTAGGTTTGTTCTCTTCCAACGAGACCAAAGAGGATATCAGCACCGCCAATCTGAAGTACATTCTGGTTCCATTTTATCTTGCGGAGTTGATGGAAAAAATAGCACAGGAGGACAGGTTACAGATTCTAAAGGCTTCCCAGGCAAAGTTAAAGGAATTTATCTCATTTTGTGAAGCAATGGAGCTGGTCCCAAAAGAGGAGTTAGAATCTTATATTGAAGGAGCACCAAAAACTGTTGTGGATCAGAGAGCTAGGAAGATTGCTAGGTTCAAGCGTCAGAGAGCTGCAGAATCAAAATTGTTAGAAATAAAAGAGCGAAAGGAACGGCGGGGACGTTCTACCAAAGCAGCTGCCCTATCCACACCTGTTGAGGCAGGAGAGGAAGAAGTATTGGATGATGATGGTGAAGAAGAAAGAGAGGCTTGGACCACCACCATATCTTTGGCAATCTGTAAGGCACTAGATCTGCTGGATATGTTGAAGAAAGAAGAAGAGATGCTTTCTGCTGTGAAGGATAGACAATCCAAGGATGGGGCTGAGTTCTCTAGGGATGGTCTGGATGAACGTGCAAAGAAAGCAGAAGCTTGGCATCGTGATGCTGCAGTTCGTGCACGGTACACTAAGCCCTCACCACCAATCACATGTGCCACTTTTGCCCAAGATGTGCTAGAAGGAAGAGCAAAGGCTTCACAAGCACACGATCACAAGCACCAACCACTGATATTTGGACCTGCCAGCCTTCTGAATGGAAGCTTAACAACAGAGAGAGAAAGAATGGCAGCTCAGGTCTTCCAACCTAGTCATAGGATGCCAACTATGAGCATTGAGGAAGCTGGACTAAAGGAAATGGAAATAATGAATAAATGGCAAGAGAGAAATGTCAAACTCATGGAAGAAGCCAATTCATCTTGGCACAATGATAGGAAGTCAAAGCCTGGAGAAGACGATGATGAAGATGACGATGCAGCACAAGAGAAAGCAAGGGCTTGGGATGACTGGAAGGATGATAATCCACGAGGTGCAGGAAATAAGAAACTTACCCCTTGTGGGTAA 1191 0.4677 MEDLPLPALFEQTRKIHADATESAVDQEVVKKGCQALHRCEDMVNNLGLFSSNETKEDISTANLKYILVPFYLAELMEKIAQEDRLQILKASQAKLKEFISFCEAMELVPKEELESYIEGAPKTVVDQRARKIARFKRQRAAESKLLEIKERKERRGRSTKAAALSTPVEAGEEEVLDDDGEEEREAWTTTISLAICKALDLLDMLKKEEEMLSAVKDRQSKDGAEFSRDGLDERAKKAEAWHRDAAVRARYTKPSPPITCATFAQDVLEGRAKASQAHDHKHQPLIFGPASLLNGSLTTERERMAAQVFQPSHRMPTMSIEEAGLKEMEIMNKWQERNVKLMEEANSSWHNDRKSKPGEDDDEDDDAAQEKARAWDDWKDDNPRGAGNKKLTPCG 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02127 396 MobiDBLite consensus disorder prediction 157 184 - -
Vimu10g02127 396 Pfam TAP42-like family 6 384 IPR007304 GO:0009966
Vimu10g02127 396 Gene3D - 5 226 IPR038511 -
Vimu10g02127 396 MobiDBLite consensus disorder prediction 347 361 - -
Vimu10g02127 396 FunFam PP2A regulatory subunit TAP46 5 227 - -
Vimu10g02127 396 MobiDBLite consensus disorder prediction 344 396 - -
Vimu10g02127 396 PANTHER IMMUNOGLOBULIN-BINDING PROTEIN 1 5 393 IPR007304 GO:0009966
Vimu10g02127 396 MobiDBLite consensus disorder prediction 369 387 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02127 K17606 - gmx:100807894 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02127 10 31309102 31313182 Vimu10g02127 10 31309102 31313182 ECH