Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02117 ATGTTCCTCTTGACCACTGTAACTGCAGCAAGAAGCTCCTTCAAAAGGGTTGCTAGGTTGGTGGTCCTTCTTCCTTTACTTTCATTTATGGGGAAGATAACGACTTCTGCAACCCAGCCTGTATCTCAAGAAGCTTCCAATTATGATGAGGTTTTTATGCAGCAGAGCTTGCTCTTCGATGATAGTTTGAAGGATTTGAAGAATCTGAGAGCACAATTATATTCAGCAGCTGAATATTTTGAACTCTCTTACACCAACGATGACCAAAAGCAAATAGTGGTAGAAACATTGAAGGATTATGCCATCAAAGCCCTAGTAAATACAGTGGACCATTTAGGTTCTGTGACCTACAAAGTAAATGATCTGTTGGATGAAAAGGTTGTTGAAGTTTCTGTTGCAGAACTAAGAGTATCTTGTATTGAACAGAGAATAAAGACTTGCCAAGAGTATATGGATCATGAAGGGCGTACCCAACAGTCATTGGTGATTAGTACTCCAAAATATCCCAAGCGTTATATCCTGCCAGGCAAGTATCTTACATTTTCATCTTCTCTTCTTATGGTGCTGTTTCCTTTTTCCATTTCTATTATATTTTTTGGGGAGACCATGCATGGTGCCAACTACACAAAGTCAAAATATGAGGGTTTAAACCTAGATGATGAAGATGACTGGCCTCACTTTAGGAATGCTGTTCGAGCCACAATTAGAGAAACACCACCTTCTACAGCAAGAAGAGGGCGTTCTCCGTCACCTTCTTTACAAACTCAGAGATCTGCAGCTTTTTCATTCACTTCTTCTTCAACCATGCCTAAAAAAGATTTAGAGAGACGATCGATTTCGCCATACCGGTTCCCCCTCCTGCGCACCGGATCTCGGTCAAGTAGGCCTACTACACCCAAGATAAGTAGACCGACCACACCAAATCCTAGCAGACCCACCACACCAAATCCTTCCAATGCAAGACAAAGGTACCCTTCCGAGCCACGGAAATCATCTTCTATGCGATTATATGCCGAAAGAGACCCTGCCAAAGACGTAGAACAGTACCCCAGTAAGAGTAAACGTCTCCTGAAGGCCTTACTAAGTAGGCGCAAGTCTAAGAAGGATGACATGCTATATACATACTTGGACGAGTACTGA 1140 0.4237 MFLLTTVTAARSSFKRVARLVVLLPLLSFMGKITTSATQPVSQEASNYDEVFMQQSLLFDDSLKDLKNLRAQLYSAAEYFELSYTNDDQKQIVVETLKDYAIKALVNTVDHLGSVTYKVNDLLDEKVVEVSVAELRVSCIEQRIKTCQEYMDHEGRTQQSLVISTPKYPKRYILPGKYLTFSSSLLMVLFPFSISIIFFGETMHGANYTKSKYEGLNLDDEDDWPHFRNAVRATIRETPPSTARRGRSPSPSLQTQRSAAFSFTSSSTMPKKDLERRSISPYRFPLLRTGSRSSRPTTPKISRPTTPNPSRPTTPNPSNARQRYPSEPRKSSSMRLYAERDPAKDVEQYPSKSKRLLKALLSRRKSKKDDMLYTYLDEY 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02117 379 MobiDBLite consensus disorder prediction 315 329 - -
Vimu10g02117 379 MobiDBLite consensus disorder prediction 333 352 - -
Vimu10g02117 379 MobiDBLite consensus disorder prediction 234 353 - -
Vimu10g02117 379 Gene3D - 49 151 - -
Vimu10g02117 379 PANTHER ABL INTERACTOR FAMILY MEMBER 45 379 IPR028457 -
Vimu10g02117 379 MobiDBLite consensus disorder prediction 241 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02117 Vimu-Chr10 31153854 31157735 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02117 - - gmx:100781924 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02117 10 31153854 31157735 Vimu10g02117 10 31153854 31157735 ECH