Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02107 ATGGCAATGGAAGTTACTCAGGTACTTTTGAATGCTCAATCAATTGATGGGAATGTCCGGAAGCATGCCGAGGACACTCTGCGACAATTTCAGGAGCAAAACCTTCCTGGATTCTTGGTCTCTCTGTCTGGAGAGTTAGCAAGTGAAGATAAACCGGTTGATAGCCGAAAGTTGGCAGGTTTAATACTGAAAAATGCTTTGGATGCCAAGGATGAAAGCAGAAAGCAGGAATTGGTTCAAAGATGGTTGTCTCTGGACCCTGTGGCGAAAGCTCAAGTTAAGTCATGCTTGCTGCAAACACTCTCTTCTCTTGCCCTTGAAGCTCGATCTACAGCAACTCAAGTAATTGCTAAAGTTGCTGGAATTGAGCTTCCTCAGAAACAGTGGCCTGAGCTGATCGGGTCACTTCTATCAAATATTCATCAAGTACCAACTCATGTAAAGCAGGCAACATTGGAGACTCTAGGGTATTTGTGTGAGGAAGTATCTCCTCAGGTTGTTGATCAAGAACAAGTAAATAAAATACTTACTGCTGTAGTTCAAGGTATGAACGCATCTGAAGGGAATAATGATGTTAGGCTTGCTGCTACAATTGCATTATACAATGCTCTTGGATTTGCTCAGGCTAATTTTACCAATGATATGGAGCGTGATTATATAATGAGAGTTGTTTGTGAAACAACTATGTCCCCAGAAGTGAAAATACGTCAAGCAGCCTTTGAATGTTTGGTCTCTATTGCTGCCATGTATTATGAGAAACTAGCTCCTTACATCCAGGATATATATAACATCACGGCAAAGGCTGTTAGGGGTGATGAGGAGCCTGTTGCTCTTCAAGCCATAGAGTTTTGGAGTACAATTTGTGATGAGGAGACTGATATCTTGGAAGAATATATAGGTGATTCCAATGGAGACTCTGAAGTACCTTGTTTTTATTTTATAAAGCAAGCCCTTCCTGCACTTATCCCTCTGCTGCTGGAAACATTACTCAAACAAGAAGAAGATCAGGATCTGGACGAAGGTGCATGGAATATTGCAATGGCAGGTGGTACATGCCTTGGTTTAGTTGCTCGTACTGTTGGAGATGATATTGTGCCACTGGTAATGCCCTTCATTGAGGAGAATATAACCAAACCAGATTGGAGGCAAAGGGAGGCAGCCTCTTACGCTTTTGGATCTATCTTGGAGGGGCCTTCCCCTGACAAATTAGCTCCTCTTGTTAACCATGCATTACCATTTATGCTCAGTGCTTTAGTGAAGGACCCAAACAACCATGTGAAAGACACCACTGCTTGGACATTGGGGCGAATGTTTGAATTTCTTCACAGTTCAATTGTTGGTACACCAATTATTAATGAGGGAAATTGCCAACAGATTATTACTGTTCTCCTTCAGAGCATGAAGGATGTTCCCAATGTTGCTGAGAAGGCCTGTGGTGCTTTGTATTTTCTTGCCCAGGGTTATGAGGATGTGGGACCAACATCTCCTATAACTCCTTTTTTTCAGGATATTGTTCAATCCCTTCTGACTGTTACTCGCAGAGAGGATGCTACAGAATCGCGGTTGAGAACTTCAGCGTATGAAACACTGAATGAAGTGGTTAGGTGTTCCACAGATGAAACAGCTCCTTTGGTGTTACAACTAGTTTCTGTCATCATGATGGAGCTGCACAAATGTCTTGAAGCGCAAAATCTTTCTTCTGATGAACGGGAAAAGCGTAGTGAATTGATAGGCCTTCTCTGTGGGTGCATGCAAGTAATTATTCAGAAGCTAGGGTCTTCAGAAGGTACCAAATATGTCTTCTTGCAGTGTTCTGATCAGATAATGGGACTATTTTTCAGGGTCTTTGCTTTTAGAAATGCCACTGCGCATGAGGAGGCAATGCTAGCCATTGGAGCCCTTGCCTACGCGATAGGCCCTGATTTTGCGAAATACATGCCAGAATTTTACAAGTTTCTTGACATGGACCTTCAGAACTTTGAGGAGTACCAAGTTTGCGCTGTCACTGTTGGTGTGGTAGGGGACATATGCAGAGCATTGGAGGATAAAATACTGCCTTATTGTGATGGGATTATGACACAACTTCTCAAAAATTTGTCGAGTGATAATTTACACCGTTCTGTGAAGCCCCCCCTGTTTTCATGCATTGGTGATATAGCACTTGCAATAGGAGATAACTTTAATAAATACTTAATGTATGCAATGAACACATTACAACTTGCTGCAGAGATGTATGCCCACACATCAGGTTTTGATGATGAAATGACAGAATACATCAATTCTTTGAGAAATGGGATATTAGAGGCATATTCTGGGATATTTCAAGGGTTTAAAAATTCATCAAAATCCCAGCTTTTGATTCCTTATGCGCCTCACATCCTCCAGTTTTTGGATAGCATATACATGGAAAAAGACATGGACGAAGTAGTTATGAAAACCGCAATTGGAGTCCTTGGAGATCTAGCTGATACCCTGGGAAGCAATGCTGGTTCTTTAATACAGCAGTCTTTGTCAAGCAGAGACTTTTTGAATGAGTGTTTGACCTCAGAAGATCATTTGATTAAGGAATCTGCTGAGTGGGCCAAGTTGGCTATCACTCGAGCTATATCTGTGGGTCTTGGGATTGCATGTGTCAATTTGTCTCCATGGTCAGACAACGTGAAGGTTATCAGTCTGAAGGTCTGTCAAGAGGAAGAAGGTAGCGATGAGTTTGCAAATGTGGGTGTAGGTCTTCATGAAACAAGTAATTGA 2751 0.4198 MAMEVTQVLLNAQSIDGNVRKHAEDTLRQFQEQNLPGFLVSLSGELASEDKPVDSRKLAGLILKNALDAKDESRKQELVQRWLSLDPVAKAQVKSCLLQTLSSLALEARSTATQVIAKVAGIELPQKQWPELIGSLLSNIHQVPTHVKQATLETLGYLCEEVSPQVVDQEQVNKILTAVVQGMNASEGNNDVRLAATIALYNALGFAQANFTNDMERDYIMRVVCETTMSPEVKIRQAAFECLVSIAAMYYEKLAPYIQDIYNITAKAVRGDEEPVALQAIEFWSTICDEETDILEEYIGDSNGDSEVPCFYFIKQALPALIPLLLETLLKQEEDQDLDEGAWNIAMAGGTCLGLVARTVGDDIVPLVMPFIEENITKPDWRQREAASYAFGSILEGPSPDKLAPLVNHALPFMLSALVKDPNNHVKDTTAWTLGRMFEFLHSSIVGTPIINEGNCQQIITVLLQSMKDVPNVAEKACGALYFLAQGYEDVGPTSPITPFFQDIVQSLLTVTRREDATESRLRTSAYETLNEVVRCSTDETAPLVLQLVSVIMMELHKCLEAQNLSSDEREKRSELIGLLCGCMQVIIQKLGSSEGTKYVFLQCSDQIMGLFFRVFAFRNATAHEEAMLAIGALAYAIGPDFAKYMPEFYKFLDMDLQNFEEYQVCAVTVGVVGDICRALEDKILPYCDGIMTQLLKNLSSDNLHRSVKPPLFSCIGDIALAIGDNFNKYLMYAMNTLQLAAEMYAHTSGFDDEMTEYINSLRNGILEAYSGIFQGFKNSSKSQLLIPYAPHILQFLDSIYMEKDMDEVVMKTAIGVLGDLADTLGSNAGSLIQQSLSSRDFLNECLTSEDHLIKESAEWAKLAITRAISVGLGIACVNLSPWSDNVKVISLKVCQEEEGSDEFANVGVGLHETSN 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02107 916 Gene3D - 1 876 IPR011989 -
Vimu10g02107 916 ProSiteProfiles Importin-beta N-terminal domain profile. 23 103 IPR001494 GO:0006886|GO:0031267
Vimu10g02107 916 SMART IBN_N_2 23 103 IPR001494 GO:0006886|GO:0031267
Vimu10g02107 916 Pfam Importin-beta N-terminal domain 23 102 IPR001494 GO:0006886|GO:0031267
Vimu10g02107 916 SUPERFAMILY ARM repeat 3 861 IPR016024 -
Vimu10g02107 916 PANTHER IMPORTIN BETA 6 844 IPR040122 GO:0006606
Vimu10g02107 916 FunFam Importin subunit beta-1 3 871 - -
Vimu10g02107 916 Pfam HEAT-like repeat 381 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02107 Vimu-Chr10 30986639 30989617 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02107 K14293 - gmx:100785130 1606.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02107 10 30986639 30989617 Vimu10g02107 10 30986639 30989617 ECH