Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02044 ATGACATTCCCCGGAAGAAACGTGGGAGGAGGGGAGATTCGTGCCCCTTGGGACATCAAAGATGAAGAACATGAGATCAGAATGAGGTTTGACATGCCGGGTCTTTCTAAGGAAAATGTTAAGGTATCAGTGGAGGACGATGTGCTTGTCATAAATGGTGGTCGCAAGAGTGAACAAGAACAAGGTGGTGATGACTCTTGGTCCAGCAGGAGCTATAGTTCCTATAACACCCGTTTGAAGCTTCCAGATAACTGCGAGAAGGACAAGGTTAAGGCAGAGTTGAAAAATGGCGTGCTCTATATCACCATTCCTAAGACCAAGGTTGAACGCAAGGTTATTGATGTCGAAGTTCATTGA 357 0.4566 MTFPGRNVGGGEIRAPWDIKDEEHEIRMRFDMPGLSKENVKVSVEDDVLVINGGRKSEQEQGGDDSWSSRSYSSYNTRLKLPDNCEKDKVKAELKNGVLYITIPKTKVERKVIDVEVH 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02044 118 CDD ACD_sHsps-like 18 105 - -
Vimu10g02044 118 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 13 117 IPR044587 GO:0009408
Vimu10g02044 118 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 8 118 IPR002068 -
Vimu10g02044 118 Gene3D - 2 117 IPR008978 -
Vimu10g02044 118 MobiDBLite consensus disorder prediction 52 73 - -
Vimu10g02044 118 Pfam Hsp20/alpha crystallin family 18 118 IPR002068 -
Vimu10g02044 118 SUPERFAMILY HSP20-like chaperones 8 115 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02044 Vimu-Chr10 30009661 30010017 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02044 K13993 - gmx:548078 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02044 10 30009661 30010017 Vimu10g02044 10 30009661 30010017 ECH