Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01961 ATGGAAATTAGTTCTTCGCTATTTCCCTTTGATTGGAGCAATGTTCCCCAGCGATTGAGGACAAAACGGAAGAGAAAATTTAATGGCAAGAAAGCACTTTCTAGACCCAACAAAGTGCACTCTAGACCAAAGAAAGCACCCTCTAGACCCAAGGAAGTACTTTCTAGACTCAAGGAAAAGCTAGACAGTGGAATTTTTGATACTTTCTTGATGATGATGTGGAAAATTTTCCCAGAAGACAGGAAGGCACAGTTTATGTGCTTTGACAGCTTATGGTTTAGCCTTTACAGGACTTCTTCATCTAAGGACAAGGTGCTGACTTGGATTAAAAAAGAACCTATTTTCTCCAAGGCATATGTTTTTGTTCCCATAGTCTGCTGGGGTCACTGGAGCCTTTTGATCCTCTGCCATTTTGGTGAGAGCTCGGAATCAACTTCTAGATCACGGTGCATGTTGTTGCTGGATTCACTTGAAATGGCCAATCCAAGGCGACTTGAACCTGAGATCAGAAGATTTGTACTAGATATTTATGAATCAATGGACCGGCCTGAGACAAAGCGAATTGTATCCCAAATTCCATTTTTGGTGCCTGAGATGAAAAAAGATTGGTTTAGCTTTGATGGCTTGGATAGGTTTCGTGAGGGACTTAATTCAGTGAATTAG 663 0.4118 MEISSSLFPFDWSNVPQRLRTKRKRKFNGKKALSRPNKVHSRPKKAPSRPKEVLSRLKEKLDSGIFDTFLMMMWKIFPEDRKAQFMCFDSLWFSLYRTSSSKDKVLTWIKKEPIFSKAYVFVPIVCWGHWSLLILCHFGESSESTSRSRCMLLLDSLEMANPRRLEPEIRRFVLDIYESMDRPETKRIVSQIPFLVPEMKKDWFSFDGLDRFREGLNSVN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01961 220 Gene3D Adenoviral Proteinase; Chain A 18 203 - -
Vimu10g01961 220 MobiDBLite consensus disorder prediction 25 45 - -
Vimu10g01961 220 MobiDBLite consensus disorder prediction 25 48 - -
Vimu10g01961 220 Pfam Ulp1 protease family, C-terminal catalytic domain 58 200 IPR003653 GO:0006508|GO:0008234
Vimu10g01961 220 SUPERFAMILY Cysteine proteinases 59 196 IPR038765 -
Vimu10g01961 220 ProSiteProfiles Ubiquitin-like protease family profile. 37 220 IPR003653 GO:0006508|GO:0008234
Vimu10g01961 220 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 55 198 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01961 - - vun:114164357 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01961 10 28481291 28483401 Vimu10g01961 10 28481291 28483401 ECH