Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01913 ATGGCTCTCGCATTGAACATCTCGGTGTGTTTCCCACACCAGCGTTGCCCAACTCTCTTCAAACCCTCCAAACCGATTCTCTCATTCCCCACCGCTTCCGCTTTCTCCTCGTTAACGCAACTCAGCGTTTCCGTAGGGGAAGATTTGCCCGACAACTACAGCGATTGGATTCCCAACTCCAACCTTCGCAGAAGATGCGGCATTCTACTCCATCCGACGTCGTTTCGAGGGCCCCACGGCATCGGCGATCTCGGTCACGAGGCCTTCCGTTTCATCGATTGGCTCCACCGCGCCGGTTGCTCCATTTGGCAGGTTCTTCCTCTCGTGCCGCCTGGCAGAAAAGCCAACGAAGAAGGATCCCCTTACTCTGGCCAGGACGCGAATTGTGGCAACACGCTCTTGATCTCTCTTCAAGGCCTCGTCGACGATGGGTTGTTGGAAAAACACGAGCTTCCACAACCGATTGATACAGAGCGCGTCAACTTTTCACTTGTTGCTGACCTTAAGGATCCTCTGATAACCAAAGCTGCAGAGAGGCTCATTTCAAGTGAAGGAGAACTCAAAACGGAGTTGGAGAATTTTCGAAGAGACCCTGACGTATCAAGCTGGCTTGAAGATGCAGCATATTTTGCTGCTATTGATGACAGTTTAAACAAAATCAGCTGGTACAATTGGCCCGAACCTTTAAAAAATCGCCATCTTGTAACTCTAGAAGACGTTTACCAACAGAAACAAGATTTTATAAATGTATTTATTGCCCAACAGTTCTTGTTTCAAAGGCAGTGGCAGAAAGTCCGCAGCTATGCACAGAGTAAGGGAATCAGCATAATGGGAGACATGCCAATATATGTTGGTTATCATAGCGCAGATGTTTGGGCAAATAAGAAGCAGTTTTTACTGAACCGGAAAGGCTTTCCTCTTTTAGTGAGTGGTGTTCCTCCTGATGCATTCAGTGAAACTGGTCAGCTATGGGGCAGCCCCCTGTATGATTGGAAAGCCATGGAGAAAGATGGATACTCATGGTGGATACGTCGCATTAAACGAGCACAAAATCTGTTTGATGAATTTAGGATTGACCACTTTAGAGGATTTGCTGGATATTGGGCTGTTCCCGCTGAAGCAAAAGTAGCTATGCTTGGAAAGTGGAAGGTAGGACCTGGGATGTCCTTGTTTGATGCCATTTTCAGCGCTGTTGGAAGGATTAATATAATAGCAGAAGACCTGGGAGTTATCACTGAGGATGTAGTCCAACTAAGAAGATCCATTGGAGCACCTGGAATGGCTGTTCTCCAGTTCGGATTTGGAGGCGATGCTAAGAACCCTCATTTGCCTCATAATCATGAGTGCAATCAAGTTGTCTATACAGGGACTCATGACAATGACACAATCAGAGGCTGGTGGGAAGCTTTGAACCAAGAAGAGAAATCCAAAGCATTAAGTTATCTTTCCTTAAATGAGGGAGATGACATTTCTTGGGCTCTAATCCAGAGAGTATTGGGCTCTGTTTCTCAAACAGCAATAATACCTATGCAAGATGTTCTTGGATTGGGTAGTTCTGGCAGGATGAATATTCCCGCAACTCAGTTTGGGAACTGGGGTTGGAGAATTGCAAGTTCGGTGAGCTTTGATGGCTTGGAGAGAGAGGCAGACAGACTCAGAGAAATGCTTGTAATGTATGGCCGGCTTTGA 1689 0.4665 MALALNISVCFPHQRCPTLFKPSKPILSFPTASAFSSLTQLSVSVGEDLPDNYSDWIPNSNLRRRCGILLHPTSFRGPHGIGDLGHEAFRFIDWLHRAGCSIWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLQGLVDDGLLEKHELPQPIDTERVNFSLVADLKDPLITKAAERLISSEGELKTELENFRRDPDVSSWLEDAAYFAAIDDSLNKISWYNWPEPLKNRHLVTLEDVYQQKQDFINVFIAQQFLFQRQWQKVRSYAQSKGISIMGDMPIYVGYHSADVWANKKQFLLNRKGFPLLVSGVPPDAFSETGQLWGSPLYDWKAMEKDGYSWWIRRIKRAQNLFDEFRIDHFRGFAGYWAVPAEAKVAMLGKWKVGPGMSLFDAIFSAVGRINIIAEDLGVITEDVVQLRRSIGAPGMAVLQFGFGGDAKNPHLPHNHECNQVVYTGTHDNDTIRGWWEALNQEEKSKALSYLSLNEGDDISWALIQRVLGSVSQTAIIPMQDVLGLGSSGRMNIPATQFGNWGWRIASSVSFDGLEREADRLREMLVMYGRL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01913 562 SUPERFAMILY (Trans)glycosidases 60 561 IPR017853 -
Vimu10g01913 562 NCBIfam 4-alpha-glucanotransferase 59 547 IPR003385 GO:0004134|GO:0005975
Vimu10g01913 562 Gene3D Glycosidases 61 562 - -
Vimu10g01913 562 Pfam 4-alpha-glucanotransferase 70 537 IPR003385 GO:0004134|GO:0005975
Vimu10g01913 562 PANTHER 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC 39 562 IPR003385 GO:0004134|GO:0005975
Vimu10g01913 562 FunFam 4-alpha-glucanotransferase, chloroplastic/amyloplastic 61 562 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01913 23 562 Glycoside Hydrolase AT5G64860 72.376 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01913 K00705 - gmx:100785271 1055.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01913 10 27542813 27557594 Vimu10g01913 10 27542813 27557594 ECH