Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01834 CCCATCTTTTTACCTCCATTGTCTATTATTATTACTTATCTGGATATTGGTGCAAGTAGGCCTGTAATTATGGGAAATACAGAGTCAATATCTGAAGATAATTTTTACCAACATGCCCCTTATTATGCTGGGAGTTCAGTGAATAATAGCTATCATCAGCCATCTACTTATACTGGGAGTTCGGAGAATACTACCTATCATGAATCATCTTATGATGGGGATTATTCGAATACTAGCTATAATCAACTCTCTACTTATGCTAGGAGCTCAGAAAACAATCGTCAGCAACCCACATATATAGCTGATCATTTCAGCTCATTGGATCAGGTTGTTTCTGCTCTTAGAGAAGCTGGTCTGGAATCTTCAAATTTAATTCTTGCTATTGACTTCACCAAAAGCAATGAGTGGACAGGCAAGCACTCCTTTCATCGAAAAAGCCTTCATCATATCGGAAACAGTCCTAATCCATATGAGCAAGCTATCTCCATCATTGGTCGTACTTTGTCTTCCTTTGATGAAGACAATCTGATACCATGTTTTGGATTTGGTGACGCTTCTACACATGATCAGAATGTGTTCAGTTTTTATGACGACAATAGATTTTGTCATGGTTTTGAGGAAGTACTTGGACGCTACAGAGAGATTGTTCCATACTTAAAACTATCAGGTCCAACATCATTTGCCCCTGTAATCGACGCAGCAATTGACATTGTGGAAAGAAACAACGGTCAATATCATGTTCTTGTCATTATTGCTGATGGACAGGTTACCAGAAATCCAGATACACCACATGGAAGGCTTAGTCCACAAGAACAAGCAACCATTAGTTCCATCATTGGTGCAAGTCACTATCCTCTCTCGATTATATTGGTTGGCGTTGGAGATGGACCATGGGATGAGATGAAGCACTTTGATGATAACATTACTGAGCGAGTATTTGACAACTTTCAGTTTGTGAATTTCACAAAAATCATGTCTGAGAACATTGAAGCATCAAAGAAGGAAGCAGCATTTGCACTTGCTGCCCTTATGGAAATTCCATTTCAGTACCGGGCAGCCCAAAATATACAACTTACTGATAGAGAATCAGTTCTTCGTCAGCATAGAAGGCCTCTCCCTCCACCTAATGAAGTAATAGATCATGATAATGCACGCATGGTTATTCCTCACATGGCAAATTTGGAATCAGTTGAACCATCGGCTCCAGCTGGTATTGAACCAGTATGCCCCATTTGTCTTAACAACCCGAAGGACATGGCTTTTGGATGTGGTCACACAGTAAACTTGCAAGGAGTGTGGTTCAACATTATCTTCATGCCCGATGTGCCGGAAGCAAATTACAACTCGCCTGAGATTGTACACTTGAGTGAAGAAGCTTATACCTATGTATATTACCCCATGGATTATACATTAAAATATGATGACGCTTCCTTTCTTACCATTTGA 1446 0.399 PIFLPPLSIIITYLDIGASRPVIMGNTESISEDNFYQHAPYYAGSSVNNSYHQPSTYTGSSENTTYHESSYDGDYSNTSYNQLSTYARSSENNRQQPTYIADHFSSLDQVVSALREAGLESSNLILAIDFTKSNEWTGKHSFHRKSLHHIGNSPNPYEQAISIIGRTLSSFDEDNLIPCFGFGDASTHDQNVFSFYDDNRFCHGFEEVLGRYREIVPYLKLSGPTSFAPVIDAAIDIVERNNGQYHVLVIIADGQVTRNPDTPHGRLSPQEQATISSIIGASHYPLSIILVGVGDGPWDEMKHFDDNITERVFDNFQFVNFTKIMSENIEASKKEAAFALAALMEIPFQYRAAQNIQLTDRESVLRQHRRPLPPPNEVIDHDNARMVIPHMANLESVEPSAPAGIEPVCPICLNNPKDMAFGCGHTVNLQGVWFNIIFMPDVPEANYNSPEIVHLSEEAYTYVYYPMDYTLKYDDASFLTI 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01834 481 SMART VWA_4 121 324 IPR002035 -
Vimu10g01834 481 Pfam Copine 146 359 IPR010734 -
Vimu10g01834 481 PANTHER COPINE FAMILY PROTEIN 1 67 426 - -
Vimu10g01834 481 MobiDBLite consensus disorder prediction 53 73 - -
Vimu10g01834 481 SUPERFAMILY vWA-like 122 305 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01834 Vimu-Chr10 25939567 25949122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01834 K16280 - gmx:100776002 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01834 10 25939567 25949122 Vimu10g01834 10 25939567 25949122 ECH