Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01817 ATGTCTCTCACACTGCCTTTCCTGTTGACCTTCCTCGCACTCTCTCAAGCTCAACCACTCTCCGATGACCCTCCGCAACCATCAACAACTGTATGCATCGTCGGCGCCGGCATCGGCGGCTCCTCCGTTGCCTATTTCCTCCGTAAATACTCCCCGGAGTCCACTCCAGCAACCGATATCCGAGTGTTCGAGTGCAACGGCGTCGTCGGAGGCCGCATAGCCACCGTGACGGTGGCGGGGGAGACCTTCGAGGCCGGAGCCTCCATTCTCCATCCTAAGAACCTGCACACAGTGGATTACGTGAAAATTCTGAACCTGAAGATCAACGAGCCTGATTCGGATCCCCTCTCTCTCGGCATTTGGAATGGGAAAAAGTTCGTTTTCAAAACTGTTACTCTTAGTTCCAATGTTCCTCTCATCAATAAGCTTCTTGAACTCCCATTTGTCGATACTTTCTTGTCGCTCTTTAATTCCGCTCGCATGTTCCTTCGCTACGGCTTCTCGCTCTTCAAGATGCAAAACTTCGTTGAGAGTGCTGTTGAGAGATTCTTAAATTACTATAAGGACACTAGTTCGAGACCCATTTTTGAGACTGTGGATGAGATGCTGCAGTGGGCTGGTCTATATAATCTTACTACAAGGACTTTGCATGATGAATTGGTGGATGCTGGGTTGTCTAACTTATTGATCGACGAACTAGTCACTGTGATCACACGTATTAATTATGGCCAGAGTGTCTCCATGAGTGGATTGGGAGGGGCAGTTTCTCTCGCAGGATCAGGCGGAGGATTATGGTCTGTCAAAGGAGGTAACTGGCAAATGGCTGCTGGACTAATTAATCGGTCAGATGTTGCACTACACCTGCACGAAGAAATAAAATCTGTTGCTGACCTTGGAGATTTTTATGAACTCAATTCAACAAAAGGAAACAGTTACAAATGTGAAGTTGCTGTGGTTGCTACACCATTGGATGAGTTAGATATTCAGTTTATTCCCCCAATTTCGATTCCTGAGAGAAAAATGCAGCACACGTATACAACTTTTGTCAGGGGCCTTCTGAACCCTTCATATTTTGGTCTCAATGGTGTGACAAAAATTCCTGATCTTGTGGGCACAGTAGAGGATCCTAGCCTTCCATTTTCATGCATTGCAGTTCTCAAGAAGCACAATGAAAAAGAATCCACTTATAAATTATTCTCTCGTCAACCAATGGAAGACACATTACTGGATAGCATCTTCAGAGCCAAACCCAATTATTTAGTCCTAAGGTGCAAGTTGGACACATATGGTTTCGAACCTGATGTTGATATTTACTTGTTGAGATTTGCATTAACTGTTGGGTTTTCTATCAAGTGTCGTCCCGTTTCCCTCCCTCCTACAAAAACGAGAAAAAGAAAACTTGAACAAGGTTGTAATATTTTGTTGATTGGTATCACTGGCAGTGTGAGGAACGAGACTATTCGGATAAACTGGGCTGCATATCCTCATTACCATGCCCCAGAAGTATTTGCACCATTTATATTGGACAAGAGGCATCTATACTACGTAAATGCATTTGAAAATGCAGCTAGCACCATGGAGACAAGTGCCGTAGCAGCTGAGAATATTGCCCGACTCATACTGTCAAGATATTTTGGCAAAGAAATTGTGAATTCATCCAATTTGTCTGCAACTTCTCGAGGAGAGGGTACTCATTTAGATTTATGA 1707 0.4435 MSLTLPFLLTFLALSQAQPLSDDPPQPSTTVCIVGAGIGGSSVAYFLRKYSPESTPATDIRVFECNGVVGGRIATVTVAGETFEAGASILHPKNLHTVDYVKILNLKINEPDSDPLSLGIWNGKKFVFKTVTLSSNVPLINKLLELPFVDTFLSLFNSARMFLRYGFSLFKMQNFVESAVERFLNYYKDTSSRPIFETVDEMLQWAGLYNLTTRTLHDELVDAGLSNLLIDELVTVITRINYGQSVSMSGLGGAVSLAGSGGGLWSVKGGNWQMAAGLINRSDVALHLHEEIKSVADLGDFYELNSTKGNSYKCEVAVVATPLDELDIQFIPPISIPERKMQHTYTTFVRGLLNPSYFGLNGVTKIPDLVGTVEDPSLPFSCIAVLKKHNEKESTYKLFSRQPMEDTLLDSIFRAKPNYLVLRCKLDTYGFEPDVDIYLLRFALTVGFSIKCRPVSLPPTKTRKRKLEQGCNILLIGITGSVRNETIRINWAAYPHYHAPEVFAPFILDKRHLYYVNAFENAASTMETSAVAAENIARLILSRYFGKEIVNSSNLSATSRGEGTHLDL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01817 568 PIRSF Prenylcysteine_oxidase 1 563 IPR017046 GO:0001735
Vimu10g01817 568 Pfam Prenylcysteine lyase 150 546 IPR010795 GO:0016670|GO:0030328
Vimu10g01817 568 SUPERFAMILY FAD/NAD(P)-binding domain 27 544 IPR036188 -
Vimu10g01817 568 FunFam Farnesylcysteine lyase 25 350 - -
Vimu10g01817 568 Pfam NAD(P)-binding Rossmann-like domain 33 98 - -
Vimu10g01817 568 Gene3D - 26 350 IPR036188 -
Vimu10g01817 568 PANTHER FARNESYLCYSTEINE LYASE 8 551 IPR017046 GO:0001735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01817 K05906 - gmx:100819877 664.84