Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01816 ATGGGTAATTTGTTTGTGAAGAAACCAAAGGTCACAGACGTTGATAAAGCAATCCTCGCTCTCAAGACCCAGAGACGCAAACTCGCCCAATATCAACAGAAGCTTGATGCAGTTATTGAAGCAGAAAAACAGGCTGCACGAGATTTGATTCGTGAAAAGAAGAAGGATAGGGCCTTGCTAGCACTGAAGAAAAAGAAGACACAAGAAGAATTGTTGAAGCAAGTTGATACCTGGCTCATAAATGTCGAGCAGCAATTAGCAGATATTGAACTGGCAAGCAAGCAGAAGGCTGTGTTTGAAAGTTTGAAGGCTGGTAATGATGCAATGAAAGCCATACAAAGTGAGATAAATATTGACGATGTTCAGAAACTTATGGATGACACCGCTGAAGCTAAAGCCTATCAAGATGAAATTAATGCAATACTGGGGGAAAAATTATCAGCAGAAGATGAGGAGGAGATTTTAGCAGAATTTGAAGACTTGGAAACCCAGCTTACAGTCCAAGATCTTCCTGAAGTTCCTCACTCAGCTCATGAAGAAAGCGAAGAAACGAAAAGAAAAGAAAAGGTATCTACGAAAGCACCAGTTACCAGTGATGCTGAAGTATCTACGAAAAGAAAAGTTATGGAGGAACCATTGGCAGCTTGA 648 0.4074 MGNLFVKKPKVTDVDKAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIREKKKDRALLALKKKKTQEELLKQVDTWLINVEQQLADIELASKQKAVFESLKAGNDAMKAIQSEINIDDVQKLMDDTAEAKAYQDEINAILGEKLSAEDEEEILAEFEDLETQLTVQDLPEVPHSAHEESEETKRKEKVSTKAPVTSDAEVSTKRKVMEEPLAA 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01816 215 Gene3D - 14 90 - -
Vimu10g01816 215 Coils Coil 131 151 - -
Vimu10g01816 215 Gene3D - 116 168 - -
Vimu10g01816 215 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 10 188 IPR005024 GO:0007034
Vimu10g01816 215 Coils Coil 14 48 - -
Vimu10g01816 215 Pfam Snf7 17 175 IPR005024 GO:0007034
Vimu10g01816 215 MobiDBLite consensus disorder prediction 173 194 - -
Vimu10g01816 215 MobiDBLite consensus disorder prediction 167 215 - -
Vimu10g01816 215 Coils Coil 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01816 Vimu-Chr10 25727528 25730820 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01816 K12195 - gmx:100820408 338.191