Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01811 ATGGATAGGTATCAGAGGGTAGAGAAGCCCAAGGCCGAGACTCCGATAAACGAGAACGAGATACGCGTTACTACTCAAGGAAGAATGAGGAATTACATCACCTACGCCACCACACTCTTTCAGGAGAAAGGATCCAACGAAATTGTTCTCAAAGCAATGGGGCGCGCAATAAATAAGACTGTAATGATTGCTGAACTGATCAAGAGAAGGATTATTGGCTTGCATCAAAATACCGTAATTGGATCAACTGATATAACTGACACATGGGAACCACTTGAAGAAGGCCTTCTTCCTTTGGAGACTACTCGCCATGTTTCAATGATCACAATTACCTTGTCAAAAAAGGAACTGGATACGTCCTCCACAGGATATCAACCTCCTCTTCCAGTTGATCAAGTAAAACCTTTAAATGAATATGAAGAGGAAGGAGAAGCCTCACCAAGGATGCGAGGAAGAGGGCGTGGTCGTGGAAGGGGCCGGGGTAGAGGAATTTACAATGGAGGTATGGAATATGGTGATGGTTGGGATGGTGGACGTGGCTATGGTGGAAGAAGCCGTGGTCGTGCTAGAGGGCGTGCTTTTAGGGGACGGGGACGGGGACGAGGCTATGGTGCCCAGCCAGTTGGGTACTATGACTATGGTGATTATGATGCTCTACCTGCCCCACGTGGCCGTGGTCGTGGAAGGGGAAGAGGTCGTGGTCGTGGAAGGGATCGGGGAGTAGCTGCTTGA 732 0.4891 MDRYQRVEKPKAETPINENEIRVTTQGRMRNYITYATTLFQEKGSNEIVLKAMGRAINKTVMIAELIKRRIIGLHQNTVIGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKKELDTSSTGYQPPLPVDQVKPLNEYEEEGEASPRMRGRGRGRGRGRGRGIYNGGMEYGDGWDGGRGYGGRSRGRARGRAFRGRGRGRGYGAQPVGYYDYGDYDALPAPRGRGRGRGRGRGRGRDRGVAA 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01811 243 FunFam DNA/RNA-binding protein Alba 1 15 117 - -
Vimu10g01811 243 Pfam Alba 19 83 IPR002775 GO:0003676
Vimu10g01811 243 SUPERFAMILY AlbA-like 16 129 IPR036882 GO:0003676
Vimu10g01811 243 Gene3D - 14 118 IPR036882 GO:0003676
Vimu10g01811 243 MobiDBLite consensus disorder prediction 138 243 - -
Vimu10g01811 243 PANTHER RIBONUCLEASE P SUBUNIT P25 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01811 Vimu-Chr10 25642095 25645400 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01811 - - gmx:100792158 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01811 10 25642095 25645400 Vimu10g01811 10 25642095 25645400 ECH