Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01807 ATGGTGTATCAATCCATTTTCCATCAAACCTTTTTGTCATTTCTCCTTTGTATCACAACTCTTTCCTTGGTTGCTTCTGATCCCACAGATGGCTTCACCCGTCTTCAACTATCTAGCTCCAACTTTCAGGTCCAAAGGCCTTACGATGTTCCACAAGACCAGCGTTACACCTTTTCAAATGGAGTGCACAGATTTATTGTATACACCACAGACAAGCCTCACACGACTAACAGCGATACAAAACCACGAACTGAGATTCGTATAACGGGGTACGATTATACATCTGGTGTGTGGCAATTTGAAGGGTATTTCTACGTCCCCAGTGGGACAACCGGGGTGTGCATCCAGCAAGTGTTCGGTGGAGCCACCCATGCCACAACCTCTCAGAGTAGGGTCTATAGTGGATCTCTCACTCATTACTTATCACCTACACTGGAACAAAACATCTACAATAAGTGGTACCGTTTCAACGTGATCCATGATGTGGGTGCTAACAACGTAAAGATTTTTATCAACGGGGTGCAGAAATTTAATGGAAATGGTCGTGGAGCCGGCCTTCACTACTTCAAGTTTGGGGTTTACGCACAGGATGGTGCTTCCTATCGCATGGAATCTCAATGGAGGGATATAAAGCTTTTTAGAAGATATTAG 651 0.4439 MVYQSIFHQTFLSFLLCITTLSLVASDPTDGFTRLQLSSSNFQVQRPYDVPQDQRYTFSNGVHRFIVYTTDKPHTTNSDTKPRTEIRITGYDYTSGVWQFEGYFYVPSGTTGVCIQQVFGGATHATTSQSRVYSGSLTHYLSPTLEQNIYNKWYRFNVIHDVGANNVKIFINGVQKFNGNGRGAGLHYFKFGVYAQDGASYRMESQWRDIKLFRRY 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01807 216 Pfam Alginate lyase 39 212 IPR014895 -
Vimu10g01807 216 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 14 215 - -
Vimu10g01807 216 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 204 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01807 Vimu-Chr10 25533597 25534521 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01807 - - gmx:100791107 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01807 10 25533597 25534521 Vimu10g01807 10 25533597 25534521 ECH