Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01794 ATGCTTTTTTTCAGAGCATGTGTTGTGTGGGCATTCCTCGATTCCTGCGATACAGGGGAGGCAGAGGAGGCTAGCGAGACAACCTCGGCGCGGTTGTGGTCTAACGTCAAACACCCAAGAACAGCAGAATCCTTCAACTTTGGTGGCACTCTAATTCCCGATATGCAATTAGCACGATGGCGAAACTTGTCGTCTCTGAAGACTCGCGTTATTCCCTCTCTCACGCATTTATCCGAGTTTCATTCCACTCCTTGTACCTCTCAAAATTGGAAGAACAAATTCAGCTCCAGTTGCTCATCATGTAAAAGTGAATTTCAGAGTCAAATCAAATTCATTACCCGTCAAAAGCGTGCTGATGCAAAGAAAGCTCTGAATAGTCTTCTTTTCAATTGTGGATCCTCTAAATTTTCATTTGAGTATGAAGGCCTAGGTAGGCATTCCAATAAAGGTCAACCAAAGTCTGCTCAGCGGTCTGGTGGAAAGCCACAAAAGAAATCTAAACGAAAAATCAGAAGGGAAAGTTTCTCTGAGGACTTTGATAGCCAACCTGAGCAAATATTCCAAGCAACATACGGTAACAAGTGTTATACGTGGTCTTATAGCAATTGGAGCGGTTGTTCTTTTGAACATTCCACATCGGGGTTTGAATGGAGGGAACATTCAAATAGGACAAACAAGTGGAAAAATGAAAGCGATGTTGAGCAGGATGATGATGACTCATGTTGTGTGGGGTCAAGTTCCGATAGAACTATTCTTGGTCTGCCTCCAACAGGTCCATTAAAGATTGAAGATGTTAAAAATGCCTTTCGGTTATCAGCTTTAAAATGGCATCCTGATAAGCATCAAGGCACTTCCCAGGCCATGGCTGAAGAAAAATTCAAACTATGTGTCAATGCATACAAAACATTGTGCAATGCTCTCTCCCCATCTTAG 933 0.4266 MLFFRACVVWAFLDSCDTGEAEEASETTSARLWSNVKHPRTAESFNFGGTLIPDMQLARWRNLSSLKTRVIPSLTHLSEFHSTPCTSQNWKNKFSSSCSSCKSEFQSQIKFITRQKRADAKKALNSLLFNCGSSKFSFEYEGLGRHSNKGQPKSAQRSGGKPQKKSKRKIRRESFSEDFDSQPEQIFQATYGNKCYTWSYSNWSGCSFEHSTSGFEWREHSNRTNKWKNESDVEQDDDDSCCVGSSSDRTILGLPPTGPLKIEDVKNAFRLSALKWHPDKHQGTSQAMAEEKFKLCVNAYKTLCNALSPS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01794 310 SUPERFAMILY Chaperone J-domain 225 305 IPR036869 -
Vimu10g01794 310 CDD DnaJ 251 305 IPR001623 -
Vimu10g01794 310 SMART dnaj_3 246 308 IPR001623 -
Vimu10g01794 310 MobiDBLite consensus disorder prediction 144 181 - -
Vimu10g01794 310 Gene3D DnaJ domain 219 308 IPR036869 -
Vimu10g01794 310 ProSiteProfiles dnaJ domain profile. 247 308 IPR001623 -
Vimu10g01794 310 Pfam DnaJ domain 251 305 IPR001623 -
Vimu10g01794 310 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 73 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01794 Vimu-Chr10 25282242 25291837 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01794 - - gmx:100526896 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01794 10 25282242 25291837 Vimu10g01794 10 25282242 25291837 ECH