Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01765 ATGGCGGAAAAAGGGGAATCATCGAAGATGGCAGCGCTGAATGCCGCTGAGGAATTGGAAACTCACGAAAGGGAACTGAAGAAGCTTACAATCACGAAGGAAGAAGAAGAAGAAGAAGAACCGACGATTCAGCTGAAAACTTCGGACGGCATCATCTTCTACGTGGAAGCTTCCATCGTGAAGCAGATGCAAACGGTGCAGGCTGTGATTGACGACGTAGGAATTGCCCCCGACGCCGTCATTCCTCTGCACAACCTAACCTGCTCTGAACTGGGCAGGATCCTGGAGTACCGGGCGAAAAAGTTCGACGAAAAGTTCATGTCGATGCTGACGTCTGACCAGATTAAGGAACTGCTACTCACTGCTAACTATCTCAACATGAGTCACATGATGGATGTGATATCCTTGGCAATTGCAAACTTCCTCAAGTACAAGACCGCTGAGTTTGCGCGGGAATTCTTCGGCATCGACAGCGATTACACGCCGGAGGAGGAGGCGGCGTATCGTGAAGCCAATGCATGGGCATTCCGAGACATCGACAGGGAGTCAGGTAATTTAGAGTTTCCGTCGTAA 573 0.5009 MAEKGESSKMAALNAAEELETHERELKKLTITKEEEEEEEPTIQLKTSDGIIFYVEASIVKQMQTVQAVIDDVGIAPDAVIPLHNLTCSELGRILEYRAKKFDEKFMSMLTSDQIKELLLTANYLNMSHMMDVISLAIANFLKYKTAEFAREFFGIDSDYTPEEEAAYREANAWAFRDIDRESGNLEFPS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01765 190 Coils Coil 12 39 - -
Vimu10g01765 190 MobiDBLite consensus disorder prediction 1 42 - -
Vimu10g01765 190 Pfam Skp1 family, tetramerisation domain 42 100 IPR016073 GO:0006511
Vimu10g01765 190 Pfam Skp1 family, dimerisation domain 130 175 IPR016072 GO:0006511
Vimu10g01765 190 PANTHER SKP1 39 174 IPR016897 GO:0006511
Vimu10g01765 190 SMART skp1_3 40 127 IPR001232 GO:0006511
Vimu10g01765 190 Gene3D Potassium Channel Kv1.1; Chain A 100 177 IPR011333 -
Vimu10g01765 190 SUPERFAMILY Skp1 dimerisation domain-like 100 174 IPR036296 GO:0006511
Vimu10g01765 190 Gene3D Potassium Channel Kv1.1; Chain A 35 99 IPR011333 -
Vimu10g01765 190 MobiDBLite consensus disorder prediction 16 42 - -
Vimu10g01765 190 SUPERFAMILY POZ domain 42 100 IPR011333 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01765 K03094 - gmx:100803525 164.851