Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01760 GTGGGTTCAACACTTTGGGTAAGGAAGAGAGAGGTTAGGGCAGAGATGGTAAGCAGAGGGTCGTATGGCTCCGGCGGCCTCTTGACTGGTAGATTCCATGCTAGAAAGCTAACCCCAAGCGTCATCACTTTCTATACCATCTTCATATTTGCTTTCTCCATCATCGTCTTCTTGTTCTACGTGAGGAACATTAGTCTTGATCAAGATCCACGACGCCCTTTCATTTATCGACAATCTAATTCTCAGCAGGTGCCAGAGTTACATGTGCACGATAAACAGCAACTTTGGGATTCTCCGTTCAATCATGGCTTACACCAGTGTGTTGAGCGGACTACAAAATATAAAGCTGCCAAAGGATTTAATCGATATCTAACTGTGAGAAGTAACGGTGGACTAAATCAAATGCGAACCGGTATATCAGACATGGTGGCTGTGGCACATATGATGAATGCAACTTTAGTCATTCCTCAATTGGATAAACGGTCATTCTGGAAAGACTCAAGTGTATTTTCAGATATATTTGATGAGCTTCATTTCATTCAATCCCTGAAAGGTGATATCAGGATTGTTAGTGAGCTTCCCAAAAACTTGGAAGGTATCCCCCGGGCTAGGAAACACTTTACTTCCTGGGCTGGGTTCGGTTACTATACAGATATGACAAGGTTGTGGAGTGACTATCAGGTGATACATGTTGCAAAATCAGATTCTCGACTTGCAAACAATGATCTTCCTCTGGACATACAGAGGTTGAGGTGCCGGGCAATGTATCAGGCGCTTCGATTTTCACCTCCAATAGAGAATTTAGGAAAGAGGTTGGTGGATCGGCTGAGATCACAAGGAGGAAGATATATTGCTCTCCATCTGAGATATGAGAAAGATATGCTGTCTTTTACCGGTTGCTCCTATGGTCTGACAGATGCAGAATCTGAAGAGCTTAGAATTTTGAGGGAGAATACAAATTATTGGAAAGTAAAAGCGATAAATTCAACAGAACAGAGAATTGGAGGATTTTGTCCACTTACTCCAAAGGAGGTGGGCATTTTTCTTCACGCTCTTGGATACCCACCATCCACACCAATATACATAGCAGCTGGAGAGATCTATGGTGGTAATACCCATCTTTCGGAGCTCTCATCCCGCTTCCCTAATCTAATCTTTAAGGAATCCCTTGCAACTTCTGAAGAGCTGAAAGATTTCACTAATCATGCTTCCCAAACTGCTGCACTTGATTACATAATATGTGTAGAGAGTGATGTATTTGTTCCGTCATATTCGGGAAATATGGCAAGAGCAGTTGAGGGACACCGCAGATTCTTAGGTCACCGCAAGACAATCAATCCAGACAGGAAAGGTCTGGTTGGAATTTTTGATATGGTGGAAACTGGAGTGCTTGAAGAAGGAAAGGAACTGTCGCAAATGGTTCAGCGGATGCACAAGAACAGGCAAGGAGCTCCAAGGAAAAGGCATGGTTCTCCGCCAGGAGTCAAAGGCCGGGCACGATTTAAGACTGAAGAGTCCTTTTATGAAAATCCATATCCTGAGTGTATATGTGGTTCTAAAAGCAAACTAGAAATAACATGA 1581 0.4307 VGSTLWVRKREVRAEMVSRGSYGSGGLLTGRFHARKLTPSVITFYTIFIFAFSIIVFLFYVRNISLDQDPRRPFIYRQSNSQQVPELHVHDKQQLWDSPFNHGLHQCVERTTKYKAAKGFNRYLTVRSNGGLNQMRTGISDMVAVAHMMNATLVIPQLDKRSFWKDSSVFSDIFDELHFIQSLKGDIRIVSELPKNLEGIPRARKHFTSWAGFGYYTDMTRLWSDYQVIHVAKSDSRLANNDLPLDIQRLRCRAMYQALRFSPPIENLGKRLVDRLRSQGGRYIALHLRYEKDMLSFTGCSYGLTDAESEELRILRENTNYWKVKAINSTEQRIGGFCPLTPKEVGIFLHALGYPPSTPIYIAAGEIYGGNTHLSELSSRFPNLIFKESLATSEELKDFTNHASQTAALDYIICVESDVFVPSYSGNMARAVEGHRRFLGHRKTINPDRKGLVGIFDMVETGVLEEGKELSQMVQRMHKNRQGAPRKRHGSPPGVKGRARFKTEESFYENPYPECICGSKSKLEIT 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01760 526 MobiDBLite consensus disorder prediction 480 495 - -
Vimu10g01760 526 Pfam GDP-fucose protein O-fucosyltransferase 123 438 IPR019378 -
Vimu10g01760 526 MobiDBLite consensus disorder prediction 477 502 - -
Vimu10g01760 526 CDD O-FucT_plant 123 444 IPR024709 -
Vimu10g01760 526 Gene3D - 259 447 - -
Vimu10g01760 526 PANTHER OS02G0726500 PROTEIN-RELATED 44 518 - -
Vimu10g01760 526 PIRSF UCP009360 14 521 IPR024709 -
Vimu10g01760 526 FunFam O-fucosyltransferase 28 253 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01760 Vimu-Chr10 24611451 24616872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01760 89 517 Miscellaneous Gene Families AT1G22460 57.674 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01760 - - gmx:100810961 936.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01760 10 24611451 24616872 Vimu10g01760 10 24611451 24616872 ECH