Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01743 ATGGCGTTCTCTGCAACTCTATCCTACACCACCTTCCCTTCTCTTCCTCGCTTCCCTCAAATTTTGAGAACAAAGAGAGTTCATTTCCCACTGATTCGTGCAGCACAGAGTGGTGAATCAGAGACCCCAGAGAGTAAGAGTGAAGGGTCATCTAAGGCTCAGTCTTCAAGTGCTGCTCCTAAGCCTCCCAAGAAACCAGTTTATTCCTTGAAGAAAGGTCAGATTGTGAGGGTGGACAAGGAGAAATATCTCAATAGCATCAATTATCTTTCTGTTGGGCACCCACCTTATTACAAAGGATTAGACTACATTTATGAAGACCGTGGTGAGGTCCTGGATATGCGTATATTTGAAACAGGAGAGTATGCTCTTATTGCATGGGTAGGGATTCCCACTGCTCCAGCTTGGCTTCCTACGTACATGCTTATCAAGTCAGAGAAGCTCGACTATGAGAGGCTATGA 462 0.4524 MAFSATLSYTTFPSLPRFPQILRTKRVHFPLIRAAQSGESETPESKSEGSSKAQSSSAAPKPPKKPVYSLKKGQIVRVDKEKYLNSINYLSVGHPPYYKGLDYIYEDRGEVLDMRIFETGEYALIAWVGIPTAPAWLPTYMLIKSEKLDYERL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01743 153 Pfam Cyanobacterial and plant NDH-1 subunit O 70 144 IPR020905 GO:0005886|GO:0016655
Vimu10g01743 153 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT O, CHLOROPLASTIC 1 153 - -
Vimu10g01743 153 MobiDBLite consensus disorder prediction 34 67 - -
Vimu10g01743 153 MobiDBLite consensus disorder prediction 38 58 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01743 - - gmx:100500669 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01743 10 24310723 24315128 Vimu10g01743 10 24310723 24315128 ECH