Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01741 ATGAAAATGATGCCTTCATCTCCCAATGAAGAACAATTTGACGTAGAAAATTCCAAGTTGGACAAAGACAAAGAAAGAACTCCAAGAAGTGCGAGGGTAGTAAAAGTCCACAATCAGGCCTTATTGTCTGGACTTGCATATTGTTTTTCCTCCTGTGGCATGATATTGGTTAACAAGTTTGTACTTTCCAGCTATGATTTCAATGCTGGGATATCCTTGATGTTGTACCAGAATTTGATTTCAGTTGTTATTGTTTCTGTGTTGAGTATTATGGGTTTAGTTTCAACCGAGCCGCTGACATGGAGATTGATTAAGGTCTGGTTGCCTGTGAATGTTATATTTGTCGGAATGCTCGTCACAAGTATGTTTAGTTTGAGATACATTAATGTAGCCATGGTGACAGTCCTGAAAAATGTTACTAATGTCATAACTGCCCTTGGTGAAATGTACTTGTTCAAGAAGCACCACGATGGCAAAGTCTGGGCAGCTCTATTTCTAATGATCATTTCAGCAATAACTGGAGGAATTACTGATCTCTCTTTTAATGCAATTGGCTATGCTTGGCAGACACTAAACTGCTTCTTAACGGCATCATATTCTCTGACTCTCCGTAGGGTCATGGATACAGCAAAGCAAGTTACCAAATCCGGAAATTTAAATGAGTTTTCGATGGTCTTGTTGAACAACACCCTTTCTTTGCCTTTGGGATTTTTCCTGATTGTTGTTTTCAATGAGGTGGATTATCTCTTAAGAACGTGA 759 0.3887 MKMMPSSPNEEQFDVENSKLDKDKERTPRSARVVKVHNQALLSGLAYCFSSCGMILVNKFVLSSYDFNAGISLMLYQNLISVVIVSVLSIMGLVSTEPLTWRLIKVWLPVNVIFVGMLVTSMFSLRYINVAMVTVLKNVTNVITALGEMYLFKKHHDGKVWAALFLMIISAITGGITDLSFNAIGYAWQTLNCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNTLSLPLGFFLIVVFNEVDYLLRT 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01741 252 SUPERFAMILY Multidrug resistance efflux transporter EmrE 83 172 - -
Vimu10g01741 252 MobiDBLite consensus disorder prediction 14 28 - -
Vimu10g01741 252 MobiDBLite consensus disorder prediction 1 28 - -
Vimu10g01741 252 Pfam Triose-phosphate Transporter family 41 238 IPR004853 -
Vimu10g01741 252 PANTHER SOLUTE CARRIER FAMILY 35 41 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01741 Vimu-Chr10 24303828 24307178 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01741 10 252 Organic Solute Cotransporters AT2G13650 75.309 2.02e-124 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01741 K15356 - gmx:100808480 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01741 10 24303828 24307178 Vimu10g01741 10 24303828 24307178 ECH