Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01726 ATGGTCCGAGGCCAATCGCTATCACCCAGGCGATCGAGTGTTGCCGAGCAGTCCGAGGTCGAACATTATCCCAATGAGTATACTCCAAGGCTTATAAAGGATCTTGAAGGAATTAAGGTAAAATATGTAGCTGCTGGTTTGCTAAGTTCAGCTTGTACTGATGAAAATGGTTCTGTTTTAGTATTTGGTGAAAGAGGAATTGAAAATTTGCGTTTAAAGGAAATGAGTGATGCGACAAGACCATCCTTGATCACTGAACTTCCATACTCAAAAGAAGTTGCTTGTGGTGGCTACCACACCTGTGTCCTGACAAATTCTGGAGAGCTTTATACCTGGGGTTCAAATGAAAATGGGTGCCTTGGCATTGGCTCCTCAGATGTCATTCATCTACCTAAACAGGTTCAAGGGCCATTCTTGAAGTCTTCGGTTAGCCAGGTTTCTTGTGGTTGGAAGCATACTGCAGCAATCTCTGAAGGAAGAGTGTTCACATGGGGCTGGGGAGGTTCCAATGGGACGTTCTCTGAAGATGGACATTCTTCTAGTGGACAATTGGGTCATGGAAGTGATGTGGACTATATAAGTCCTACGAGAGTTTGCTTTGGAGAAGACGTGAAAGTGTTGCAAGTTTCATGCGGGTTCAATCATACAGGTGCTATACTGGAATATGCATAG 672 0.442 MVRGQSLSPRRSSVAEQSEVEHYPNEYTPRLIKDLEGIKVKYVAAGLLSSACTDENGSVLVFGERGIENLRLKEMSDATRPSLITELPYSKEVACGGYHTCVLTNSGELYTWGSNENGCLGIGSSDVIHLPKQVQGPFLKSSVSQVSCGWKHTAAISEGRVFTWGWGGSNGTFSEDGHSSSGQLGHGSDVDYISPTRVCFGEDVKVLQVSCGFNHTGAILEYA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01726 223 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 57 106 IPR000408 -
Vimu10g01726 223 Gene3D - 13 222 IPR009091 -
Vimu10g01726 223 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 159 222 IPR000408 -
Vimu10g01726 223 MobiDBLite consensus disorder prediction 1 20 - -
Vimu10g01726 223 Pfam Regulator of chromosome condensation (RCC1) repeat 106 156 IPR000408 -
Vimu10g01726 223 Pfam Regulator of chromosome condensation (RCC1) repeat 177 219 IPR000408 -
Vimu10g01726 223 PRINTS Chromosome condensation regulator RCC1 signature 159 175 IPR000408 -
Vimu10g01726 223 PRINTS Chromosome condensation regulator RCC1 signature 58 74 IPR000408 -
Vimu10g01726 223 PRINTS Chromosome condensation regulator RCC1 signature 109 125 IPR000408 -
Vimu10g01726 223 PRINTS Chromosome condensation regulator RCC1 signature 90 103 IPR000408 -
Vimu10g01726 223 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 107 159 IPR000408 -
Vimu10g01726 223 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 25 220 - -
Vimu10g01726 223 SUPERFAMILY RCC1/BLIP-II 23 219 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01726 Vimu-Chr10 23878823 23884682 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01726 - - vun:114196144 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01726 10 23878823 23884682 Vimu10g01726 10 23878823 23884682 ECH