Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01657 ATGGGTTCGGGTTCGGGGTCCGATTCCAATGGATGGAATCGTGCCCGAGGCTTGGCGGTTAAGACTCTGTTACTCATTGGTGGCGCACTTCTTGTCAAGCGACTGCGCAAGTCAACCACGCGCTGGGACCATGCTCATTTCGTCTCTAAGGCCCTCACCGGTCAAAAGTATTCAAAGGACCAAGCTTCCAGAGACCCTGATAACTATTTCAATATTAGAATGCTTACATGCCCCGCCGCAGAGCTAGTGGATGGTTCCAAGGTGTTGTATTTTGAACAGGCTTTTTGGAGGAGTCCACAAAAACCCTTTCGGCAGAGGTTTTTTATGGTGAAACCTTGTCCGAAAGAGTTGAAATGTGACGTTGAGTTAAGTGCATATGCCATTAGAGACATGGAGGAGTACAAAAATTTCTGTGATCGGCCAAGGGATCAGCGTCCACAGCCAGAAGAAGTCATCGGGGTAAGCATTTAG 471 0.4841 MGSGSGSDSNGWNRARGLAVKTLLLIGGALLVKRLRKSTTRWDHAHFVSKALTGQKYSKDQASRDPDNYFNIRMLTCPAAELVDGSKVLYFEQAFWRSPQKPFRQRFFMVKPCPKELKCDVELSAYAIRDMEEYKNFCDRPRDQRPQPEEVIGVSI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01657 156 Pfam CpeT/CpcT family (DUF1001) 48 151 IPR010404 GO:0016829|GO:0017009
Vimu10g01657 156 Gene3D CpcT/CpeT domain 43 153 IPR038672 -
Vimu10g01657 156 PANTHER CHROMOPHORE LYASE CRL, CHLOROPLASTIC 1 153 IPR010404 GO:0016829|GO:0017009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01657 - - ccaj:109806559 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01657 10 21900341 21901887 Vimu10g01657 10 21900341 21901887 ECH