Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01633 ATGGAGAACAGTACTGGGTTGTGTGTGTTATGGGTTATACTCTTGTTGGGGTGTGTCATTTCCTCAGAATCTAAGTATATAAGGTATAACACAACAACATCCATTGACCCTGGCAAGATCAACGTTCACTTGGTCCCTCACACTCATGACGATGTTGGCTGGTTGAAGACCATTGATCAGTATTATGTTGGTTCCAACAACTCAATTCAGGGAGCATGCGTTCAGAACGTGCTCGATTCCCTGGTACCCGCATTGTTGGCTGACAAGAATCGCAAGTTCATTTATGTTGAGCAGGCATTTTTTCAGCGATGGTGGAGAGAACAAAGTGATGATATTCGGAACATAGTCAAGGGGCTGGTCAAATCTGGTCAAATGGAGTTCATAAATGGAGGTTTTTGTATGCATGATGAGGCTGCTACTCATTACATTGACATGATTGATCAGACAACTCTTGGACATCAATTTCTCAAAGAAGAATTTGGAGTGACACCGAGAATAGGGTGGCAGATTGATCCATTTGGACATTCTGCTGTTCAGGCCTACTTGTTGGGGGCAGAGGTTGGATTTGACTCTCTATTCTTTGCACGGATTGACTATCAAGACAGAGCAAAGAGAAAAGATGAAAAAACTCTTGAAGTTGTGTGGCGGGGCTCTAAGAGCTTTGGTTCATCATCACAGATATTTTCTGGTGCGTTCCCTGAGAATTATGAACCTCCCAGTAATTTCTACTACGAAGTAAATGACGATTCTCCCATTGTTCAGGATGATGTCAATTTATTCGACTACAATGTCCCTGAAAGAGTAAACGAGTTTGTCGCAGCAGCAATATCACAGGCCAATATTACGCGCACAAATCATATCATGTGGACTATGGGGACAGATTTCAAGTACCAAAACGCGCAGAGCTGGTTTCGGCAAATGGATAAGTTTATTCACTATGTTAATCAAGATGGTCGGGTCCATGCCTTATACTCAACCCCGTCAATATACACTGATGCCAAACATGCTACAAATGAGGCATGGCCAATCAAGACTGATGACTACTTTCCGTATGCAGATCGTGTGAATGCATATTGGACAGGGTATTTTACAAGCAGGCCTGCTCTCAAAGGTTATGTCAGACTGATAAGTGGATACTACTTGGCAGCAAGACAGTTGGAGTATTTCAAAGGGAAGAATGCCTTAGGTCCAAAAACTGATTCATTGGCCGAAGCTTTGGCTATTGCTCAGCATCATGATGCAGTATCTGGCACCGAAAAGCAGCACGTTGCTAATGATTATGCCAAACGGCTTTCAATAGGTTATACAGAGGCTGAGAAAGTTGTTGCAGAATCACTTGCTTGTTTGACAGAGGGAGCAACCAAAACGGGATGTAAGAACCCACAGATTATATTTCAACAGGCAAGTAGTGATGTTCTCTGTTCAACAACTTGTCCACTTCTGAACATAAGTTACTGTCCTGCATCAGAAGTCAATTTCTCCAATGGAAAAAACCTGGAGGTTGTTGTTTACAATCCTTTGGGATGGAAACGAGAAGATATCATAAGGATTCCAGTGAGTGTCCTATCTGCTTCATGCATAAGCATTTCTTCAATACTTTATGTGCCAATTGATGCCTTAGAGTTGAAGCATTGTAATTGTAATACATTTGTTCTTGTTGTCAATGAAAACGTTGGTGTTCGGGATTCCAGCGGGAAAAGAGTCCAATCCCAGTTGGTGCCAATACCTGATTTTTTTCTTGGTTTAAGAAATTATCACACTATGGCATACTTGGGAGTGTCTCCAACTGTGAAACCCAAATACTGGCTTGCTTTTCCAGCAACTGTTCCCCCACTTGGTTTTAGCACTTACTATGTATCCTATGCCAAAAATGAAGCTACTATTTCAGATAGACATGCAGCTCACAAGCCAAAGAATGGAAGTGATATAATTACAGTGGGTCTAGAAAACTTGAAATTAACTTATTCTGTGACGGAACGGAAACTTACTGAATATATCAACAGCAGAAGCAAGGTGGAAGAAGCCCTAGAGCAGGCATATAAATTTTACGCCGGCAAAGGAGTTGATAAAGATGAAACTGTTCCTCAGGCATCTGGAGCATATATATTTAGACCTGATGGTTCACCATTTCCCATCAATTCCAAGAGGAAGAAGTCTCCTCTCATAGTTTTTCGGGGACCAATTGTGCATGAAGTGCATCAGCAGATTGATTCATGGATATACCAGACTACTAGACTGTACAAGGGCAAAGAACATGCTGAGGTTGAGTTTATTGTTGGACCTATACCCATAGATGATGGAGTTGGCAAGGAAATTGCAATTGAGATTAAAACAAATTTGGCAAGCAACAAAACCTTCTATACTGATTCCAATGGACGTGATTTCATTGAGCGTGTTCGAGACTACAGAAAAGACTGGCACTTGGAAGTGAATCAACCTGTTGCTGGAAATTATTATCCAATCAACCTTGGGATTTACCTGAAAGATAAAAGGAAAGAGTTTTCTATTTTGGTAGATAGAGCTGTGGGGGGCTCCAGCATCATGGATGGACAATTGGAACTAATGGTTCATAGGAGGTTACTTGAGGATGATTCCAGAGGTGTTGCAGAGGCACTGAATAACACAGTTTGCATCCATAATACATGCACAGGGTTGACTGTGCTAGGGAAATACTATTTCAGAATTGATCCAGTAGGAGAGGGTGGTAGATGGCGTCGATCATTTGGTCAGGAGATATACTCACCCTTACTTTTAGCCTTCACAGAGAGTGACGCACACCGGGGAGAATCTCATGTCACAATCTTCTCGGGAATAGATTCCTCATACAGCTTACCGGATAACGTTGCAATAATAACCCTCCAGGATCTGGGTGACGGGAAAGTTCTCCTTCGGTTGGCACACTTATACGAGATTGAGGAGGACAAATATCTTTCAGTTAAGGCAACTGTAGAACTGAAGAAGGTGTTTTCCTCCAAACAGATAAAGAAAATAACTGAAGTGAGCTTATCAGCTAACCAAGAAAGAGCAGAAATGGAGAGGAAGAGATTGGTTTGGAAGGTAAAAGGGTCACCTCGAGAATCTAAGGTGTGGAGGGGAGGACCAGTAAATCCAGAAAATCAAATTGTAGAACTTGCTCCCATGGAAATTCGGACTTTTGTTATCAGTTTTAGGCCTTAA 3177 0.4183 MENSTGLCVLWVILLLGCVISSESKYIRYNTTTSIDPGKINVHLVPHTHDDVGWLKTIDQYYVGSNNSIQGACVQNVLDSLVPALLADKNRKFIYVEQAFFQRWWREQSDDIRNIVKGLVKSGQMEFINGGFCMHDEAATHYIDMIDQTTLGHQFLKEEFGVTPRIGWQIDPFGHSAVQAYLLGAEVGFDSLFFARIDYQDRAKRKDEKTLEVVWRGSKSFGSSSQIFSGAFPENYEPPSNFYYEVNDDSPIVQDDVNLFDYNVPERVNEFVAAAISQANITRTNHIMWTMGTDFKYQNAQSWFRQMDKFIHYVNQDGRVHALYSTPSIYTDAKHATNEAWPIKTDDYFPYADRVNAYWTGYFTSRPALKGYVRLISGYYLAARQLEYFKGKNALGPKTDSLAEALAIAQHHDAVSGTEKQHVANDYAKRLSIGYTEAEKVVAESLACLTEGATKTGCKNPQIIFQQASSDVLCSTTCPLLNISYCPASEVNFSNGKNLEVVVYNPLGWKREDIIRIPVSVLSASCISISSILYVPIDALELKHCNCNTFVLVVNENVGVRDSSGKRVQSQLVPIPDFFLGLRNYHTMAYLGVSPTVKPKYWLAFPATVPPLGFSTYYVSYAKNEATISDRHAAHKPKNGSDIITVGLENLKLTYSVTERKLTEYINSRSKVEEALEQAYKFYAGKGVDKDETVPQASGAYIFRPDGSPFPINSKRKKSPLIVFRGPIVHEVHQQIDSWIYQTTRLYKGKEHAEVEFIVGPIPIDDGVGKEIAIEIKTNLASNKTFYTDSNGRDFIERVRDYRKDWHLEVNQPVAGNYYPINLGIYLKDKRKEFSILVDRAVGGSSIMDGQLELMVHRRLLEDDSRGVAEALNNTVCIHNTCTGLTVLGKYYFRIDPVGEGGRWRRSFGQEIYSPLLLAFTESDAHRGESHVTIFSGIDSSYSLPDNVAIITLQDLGDGKVLLRLAHLYEIEEDKYLSVKATVELKKVFSSKQIKKITEVSLSANQERAEMERKRLVWKVKGSPRESKVWRGGPVNPENQIVELAPMEIRTFVISFRP 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01633 1058 FunFam Alpha-mannosidase 933 1058 - -
Vimu10g01633 1058 FunFam Alpha-mannosidase 538 645 - -
Vimu10g01633 1058 Gene3D Glycoside hydrolase family 38, central domain 321 399 IPR037094 GO:0004559|GO:0006013
Vimu10g01633 1058 Gene3D - 933 1057 - -
Vimu10g01633 1058 FunFam Alpha-mannosidase 399 455 - -
Vimu10g01633 1058 SUPERFAMILY Glycoside hydrolase/deacetylase 29 353 IPR011330 GO:0005975
Vimu10g01633 1058 SUPERFAMILY Galactose mutarotase-like 475 1056 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vimu10g01633 1058 Gene3D - 547 642 IPR013780 -
Vimu10g01633 1058 FunFam Alpha-mannosidase 645 914 - -
Vimu10g01633 1058 Pfam Glycosyl hydrolases family 38 C-terminal domain 651 866 IPR011682 GO:0004559|GO:0006013
Vimu10g01633 1058 Gene3D Glycoside hydrolase family 38, central domain 400 455 IPR037094 GO:0004559|GO:0006013
Vimu10g01633 1058 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 947 1052 IPR041147 -
Vimu10g01633 1058 Gene3D Glycoside hydrolase 38, N terminal domain 40 320 IPR027291 -
Vimu10g01633 1058 SMART Alpha_mann_mid_2 357 431 IPR015341 GO:0004559|GO:0006013
Vimu10g01633 1058 Pfam Alpha mannosidase middle domain 357 449 IPR015341 GO:0004559|GO:0006013
Vimu10g01633 1058 FunFam Alpha-mannosidase 319 398 - -
Vimu10g01633 1058 Pfam Glycosyl hydrolases family 38 N-terminal domain 41 352 IPR000602 GO:0004559|GO:0006013
Vimu10g01633 1058 CDD GH38N_AMII_LAM_like 40 316 - -
Vimu10g01633 1058 Gene3D - 477 533 IPR013780 -
Vimu10g01633 1058 PANTHER ALPHA-MANNOSIDASE 12 1056 - -
Vimu10g01633 1058 FunFam Alpha-mannosidase 40 320 - -
Vimu10g01633 1058 Gene3D - 644 914 - -
Vimu10g01633 1058 SUPERFAMILY Families 57/38 glycoside transferase middle domain 356 450 IPR028995 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01633 Vimu-Chr10 20681988 20690037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01633 1 970 Glycoside Hydrolase AT5G13980 65.949 0.0 1311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01633 K01191 - gmx:100798150 1808.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01633 10 20681988 20690037 Vimu10g01633 10 20681988 20690037 ECH