Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01582 AATATTGTTTGTTCTGTGAATTTAATTTCAGTGGCTGCAGAACAGGTGTTGGTTGATGAAATCCCTTATCCTTCTAAGATCACTGCTACCAAGCCCCTGTCTCTGCTGGGTCATGGAATCACCGACATGGAGATCCACTTTATCCATGTGAAATTCTATTCAATCGGGGTCTATTTCGAGCCTGAAGTAGTAAGCCACTTGCAGCAGTTCAAAGGAAAACCAGCAAAGGAGCTGGAAGAGAATGATGAGTTCTACGATGCTCTTATTTCTGCTCCGGTAGAAAAGTTTATTAGACTTGTGGTGATCAAAGAGATCAAGGGTGCACAATATGGGGTTCAGATTGAGAGTGCTGTGAGGGATAGGTTGGCAGCTGAGGACAAATTTGAGGAAGAAGAAGAAGAGGCTTTGGAAAAAGTCATTGAATTTTTCCAGTCTAAGTACTTCAAGAAGCATTCAGTGATCACATACAATTTCCCAGCAAATTCTACTACTGCTGAGATTGTGGTATCTTTGGAGGGGAAAGAAGACTCAAAGTTTGTGTTAGAGAATGGCAATGTGGTGGAGGCCGTCAAGAAATGGTACCTTGGTGGCTCAACAGCAGTGTCTTCCACAACCATTCAATCTCTGGCTGCCACTTTTTCTCAGGAGCTCTCCAAGTGA 660 0.4318 NIVCSVNLISVAAEQVLVDEIPYPSKITATKPLSLLGHGITDMEIHFIHVKFYSIGVYFEPEVVSHLQQFKGKPAKELEENDEFYDALISAPVEKFIRLVVIKEIKGAQYGVQIESAVRDRLAAEDKFEEEEEEALEKVIEFFQSKYFKKHSVITYNFPANSTTAEIVVSLEGKEDSKFVLENGNVVEAVKKWYLGGSTAVSSTTIQSLAATFSQELSK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01582 219 Gene3D - 22 194 IPR016088 -
Vimu10g01582 219 Pfam Chalcone-flavanone isomerase 28 215 IPR016087 -
Vimu10g01582 219 Coils Coil 114 134 - -
Vimu10g01582 219 PANTHER CHALCONE--FLAVONONE ISOMERASE 3-RELATED 12 219 IPR044191 -
Vimu10g01582 219 Gene3D - 63 215 IPR016089 -
Vimu10g01582 219 SUPERFAMILY Chalcone isomerase 14 218 IPR036298 GO:0016872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01582 K01859 - gmx:778027 357.066