Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01513 ATGGAACAAGGGAAGCAAGGAATTATGGTGGCGTCTCAGAGTCAGAATCCCTTAGAGCAAATCCAAGCACGTTTCAAGGAATTGGAGAATGGCTTCAAACTCTGGCTCTCCAAGCAGTCTCTCCCCGTCGAGGCCGCCGTCGTCACCACCACCAGCGCCGCCCAGGGCGCCGCCATCGGCGCCTTCATGGGAACCCTCACCGCCGATGCTCCCTCTGCCTTCCCCACCCCTCCGCCCAACGCCGCTCTCAACCCTCAGGCCATGGCATCTCTTAAACAAGCTCAGGCTCTAGCTGGAGGTCCTTTTATTCAGGCTCGGAACTTTGCTGTGATGACGGGAGTGAATGCTGGAATTTCCTGTGTCTTGAAAAGGTTGAGGGGAAAGGAAGATGTTCAGTCCAGCATGGCGGCAGCTTTTGGTTCGGGGGTCATGTTTTCATTGGTAAGTGGCATGGGTGCACCAAATCAAGCAACAAACGCAGTCACTTCTGGACTTTTCTTTGCACTTGTTCAAGGTGGACTTTTCCAGATAGGACAAAAGTTTTCCCAACCTCCGGTTGAAGATATTCACTATGCTAAAACAAGACACATGTTGAACAATCTCGGCCTTCTGAGTTACGAGAAGAATTTTAAGAAAGGCTTGTTAACCGACAATACTTTGCCTTTACTCACAGACAGTGCTCTCAGAGACGTGAGGATTCCCCCGGGACCAAGACTTTTGATTCTTGACCACATTCAAAGGGACCTTGATCCCAAGGAGAAGCGAGGAAGCCGACATTGA 780 0.5103 MEQGKQGIMVASQSQNPLEQIQARFKELENGFKLWLSKQSLPVEAAVVTTTSAAQGAAIGAFMGTLTADAPSAFPTPPPNAALNPQAMASLKQAQALAGGPFIQARNFAVMTGVNAGISCVLKRLRGKEDVQSSMAAAFGSGVMFSLVSGMGAPNQATNAVTSGLFFALVQGGLFQIGQKFSQPPVEDIHYAKTRHMLNNLGLLSYEKNFKKGLLTDNTLPLLTDSALRDVRIPPGPRLLILDHIQRDLDPKEKRGSRH 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01513 259 Pfam Tim17/Tim22/Tim23/Pmp24 family 46 169 - -
Vimu10g01513 259 Gene3D - 191 255 IPR013761 -
Vimu10g01513 259 SUPERFAMILY SAM/Pointed domain 189 250 IPR013761 -
Vimu10g01513 259 CDD SAM_superfamily 196 247 - -
Vimu10g01513 259 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 13 233 IPR039175 GO:0042721|GO:0045039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01513 - - gmx:100813121 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01513 10 16663458 16667977 Vimu10g01513 10 16663458 16667977 ECH