Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01463 ATGTGTCTTGTTTTGTTTTTGGGTGTAATCAGGCAACATCATATCCTTTATGGTGTTCCTCGCTCCACTAAACGTGTGATAAAGACGAAAAGCGTGGAATTCATGCCTTTAAGTTTGTCCTTCTTTTTGACCTTAAATGCTATCATGTGGTTCTTCTATGGCCTTCTCCTCAACGACTACTACATCGCTCTCCCAAATACACTAGGTTTTCTATTCGGCATAATTCAGATGGTGCTGTATTTGATTTATAGAAACCCCAAGACAAATAAGGTAACGAAATTGCAAGAACTAAATAGTCATGAGATTATTGACATTGGGGAACCGTCTGAGCTGAATCATGTAAGCAGTGGTGCTGTGACTGAGATTGCTACTGAGGATCCAAATAGAAGAGAAGGAAATTGA 402 0.393 MCLVLFLGVIRQHHILYGVPRSTKRVIKTKSVEFMPLSLSFFLTLNAIMWFFYGLLLNDYYIALPNTLGFLFGIIQMVLYLIYRNPKTNKVTKLQELNSHEIIDIGEPSELNHVSSGAVTEIATEDPNRREGN 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01463 133 Gene3D - 2 96 - -
Vimu10g01463 133 PANTHER RAG1-ACTIVATING PROTEIN 1 15 91 IPR047664 -
Vimu10g01463 133 Pfam Sugar efflux transporter for intercellular exchange 24 87 IPR004316 GO:0016020
Vimu10g01463 133 FunFam Bidirectional sugar transporter SWEET 2 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01463 Vimu-Chr10 15851212 15853865 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01463 24 133 Miscellaneous Gene Families AT5G50790 48.246 3.93e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01463 K15382 - gmx:100794434 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01463 10 15851212 15853865 Vimu10g01463 10 15851212 15853865 ECH