Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01436 ATGGGAGGTGGTAAATCCAGATCTTTCATTCTAGTTCTCTTTCTCTTTGTGTTCCTCTGTGTTTTTGCAAGGGCGCAACAACAGCAACCTATAAAAAACGTTGTTGTTTTGGTTATGGAGAACCGTTCCTTTGACCACATGCTGGGTTGGATGAAAGAGAGAATCAACGCGTTAATCAATGGGGTCACGGGAGATGAATGCAACCCTGTTTCTACTAAAGGTTCGAAGCAAGATTCAATTTGCTTCACCGATGATGCAGAGTTCGTGGATCCGGATCCTGGGCATTCATTTGAAGATGTGTTGCAGCAGGTATTCGGGTCTGGTTCGATCCCTTCCATGAATGGATTTGTTGAGCAAGCATTGTCCTTGTCTCAGAACCTCTCTGAGACTGTAATGAAAGGGTTTAAGCCCGAGGCTGTGCCGGTTTATGCTGCTTTGGTTAAGGAATTTGCTGTTTTTGATAGGTGGTTTTCTTCAATTCCTGGTCCAACACAACCCAATAGGCTTTTTGTGTACTCAGCAACCTCTCATGGTTCCACAAGTCATGTCAAGAGGCAGTTAGCGAAAGGGTACCCTCAAAAAACCATCTTTGATTCTCTGCATGAGAATGGCCTGGACTTTGGCATTTACTTTCAGAACATACCCACAACTTTGTTCTATAGGAATCTGAGGAAATTGAAGTACGTATTCAAGTTCCATCAGTATGATTTGAAGTTCAAGAGAGATGCCCGAAATGGGAAGCTTCCACCCTTGACTGTGATTGAGCCTAGATACTTTGACTTGAAGGGCATACCCGCGAATGATGACCACCCATCTCACGATGTTGCACATGGCCAAATGCTGGTTAAGGATGTTTACGAGGCTCTAAGAACCAGCCCTCAGTGGAATGAAACACTTTTCATCATTACATATGATGAACATGGTGGATTTTTTGATCATGTGAAGACCCCTTTTGTCAACATTCCTAATCCAGACGGGAACACCGGACCTGCTCCCTATTTCTTCAAGTTTGATAGGTTAGGGGTTCGGGTTCCTACTATTATGATCTCTCCTTGGATCAAGAAAGGAACTGGTAATCTCAAAATCCTAGTTAATTATCCTTTTTTAGCGTCTACTCTTTTGTCAAAGCAATTATGCATATTTTTCTATGATAGAGATATTCTAAAGCTTCAACTTGCTTTTGATTGGTCTGAGATGTCTACTAATTTTAATTTACTACTTGGTCCAAATTTCTCAGTGATAAGTGGTGCCAAAGGACCTGCTGAAAACTCAGAATTTGAGCACTCTTCTATTCCTGCAACCATAAAGAAGATCTTCAACCTTTCCTCCAACTTTCTGACCCACAGGGATGCTTGGGCTGGGACATTCGAGCATATTGTTGGAGATTTAAGTTCACCCAGAACGGATTGCCCAGTGACTTTGCCGGACGTGACCCCTCTAAGGAGCACTGAAGCAAAAGAAGATGCAGGCCTGTCTGAATTTCAGAGTGAGGTAGTTCAATTGGCAGCAGTTCTTAATGGGGATCATTTCTTGAGCAGTTTCCCTGATGAAATGAGCAAGAAGATGAGTGTGAAGGAAGCTCATGAATACGTTCGAGGAGCTGTCTCAAGGTTCATAAGAGCTAGCAAAGAGGCCATCAAGTTAGGGGCTGATGAATCTGCCATTGTGGATATGAGATCCTCTCTCACTACTAGGTCTTCAGTTCATAATTAA 1713 0.4285 MGGGKSRSFILVLFLFVFLCVFARAQQQQPIKNVVVLVMENRSFDHMLGWMKERINALINGVTGDECNPVSTKGSKQDSICFTDDAEFVDPDPGHSFEDVLQQVFGSGSIPSMNGFVEQALSLSQNLSETVMKGFKPEAVPVYAALVKEFAVFDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKRQLAKGYPQKTIFDSLHENGLDFGIYFQNIPTTLFYRNLRKLKYVFKFHQYDLKFKRDARNGKLPPLTVIEPRYFDLKGIPANDDHPSHDVAHGQMLVKDVYEALRTSPQWNETLFIITYDEHGGFFDHVKTPFVNIPNPDGNTGPAPYFFKFDRLGVRVPTIMISPWIKKGTGNLKILVNYPFLASTLLSKQLCIFFYDRDILKLQLAFDWSEMSTNFNLLLGPNFSVISGAKGPAENSEFEHSSIPATIKKIFNLSSNFLTHRDAWAGTFEHIVGDLSSPRTDCPVTLPDVTPLRSTEAKEDAGLSEFQSEVVQLAAVLNGDHFLSSFPDEMSKKMSVKEAHEYVRGAVSRFIRASKEAIKLGADESAIVDMRSSLTTRSSVHN 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01436 570 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 24 541 IPR007312 GO:0016788
Vimu10g01436 570 SUPERFAMILY Alkaline phosphatase-like 146 356 IPR017850 -
Vimu10g01436 570 Gene3D Alkaline Phosphatase, subunit A 261 489 IPR017850 -
Vimu10g01436 570 Pfam Phosphoesterase family 31 362 IPR007312 GO:0016788
Vimu10g01436 570 Gene3D Alkaline Phosphatase, subunit A 22 193 IPR017850 -
Vimu10g01436 570 FunFam non-specific phospholipase C6 22 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01436 Vimu-Chr10 15300409 15302795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01436 8 565 Acyl Lipid Metabolism Gene Families AT3G48610 71.174 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01436 K01114 - qsa:O6P43_023562 879.011