Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01395 ATTATTTACCAAGAGAGACCTGTCATTGGTATTGATTCACTAAATAGCACTTTTTGCCAGATTTTAAGACGTTTTAATTCATTATGCAGGTACTACAATGATCTATTTGTATTTGACCTTGATCAATTCAAGTGGCAAGAAATAAAGCCTAAGCCTGGAGCAATGTGGCCAACTGCACGTAGTGGTTTTCAATTATTTGTTTACCAAGATGATATATTTTTGTATGGTGGCTATTCAAAAGAAGTTTCATCTGATAAGAACAACTCTGAGAAAGGAATTGTTCATTCAGATATGTGGTCACTCGATCCTAAGACTTGGGAATGGAACAAGGTGAAGAAAAGTGGAATGCCTCCTGGTCCCCGTGCTGGGTTTTCAATGTGTGTTCATAAGAGGAGGGCTCTGCTATTTGGTGGCGTTGTGGATATAGAAGTTGAAGGTGATGTAATGATGAGCTTGTTTTTGAATGAACTTTACGGGTTTCAGTTAGACACCAATCGCTGGTATCCTCTGGAGTTAAGAAAGGAGAAGTCCACAAAAGATAAGTTAAAAAAAGCTGAACAAAGTTGTCCTGATGATGTCAACAAGAAGATAAATTCAGCATGTACAACAAGAGAAGAAACTGTGGACTCAGAGGATGAAGAAAGCAGCATTGATGATATATCCAAAAATATAACATCAAACATGTCTATTGTTGATAGTGAAAATCATACCAACTCTGACGGAAAGTCCAAGGAATCTGGTGCTAAATTGGACATTCAAAGTTCTTTGCCTGAGGTAGTGAAGCCCTGTGGACGTATTAATGCTTGCATGGCCGTTGGAAGAGACACGTTATATATATATGGTGGAATGATGGAGATTAAAGATCAAGAAATCACTCTTGACGATCTGTATTCTTTGAACCTTAGCAAACTTGATGAATGGAAGTGCATCATACCGTGGTGCAGTAGCACAGCGAATGCCCTTATTGTGGCCACTGACGCTGCTACAGAAAAGTGCAACACTATGGCAGTGCAAATAGTGGCCATGGGCCGCTATAGCATGTCATACTATAGATTCAAAGCTTCAGAATCTGAATGGGTGGAAGCTTCAGAAGATGATGAAGAAGATGAAGATGGTGATGAAGATGAGTCTGATGAGAGTTCAACTAATGAGGACGATGATGAGGAAGAAGAGGAGGAAGAGGTTTCCTACATTATTAAGTTGGCTTTACCTTTTGATCACTACCAGGCTCAGAATGCATCAGTTGAGGTGGGAGATGCTGTTGCTCTAATCAAAGGTGTTGGAAAGAATCTGCGGAGGAAAGAAAGGAGGTCACGGATAGAGCAGATTAGAGCCAGTCTTGGCTTGTCCGATTCACAGAGAACACCAATGGTAATGCATTGTTAG 1386 0.4026 IIYQERPVIGIDSLNSTFCQILRRFNSLCRYYNDLFVFDLDQFKWQEIKPKPGAMWPTARSGFQLFVYQDDIFLYGGYSKEVSSDKNNSEKGIVHSDMWSLDPKTWEWNKVKKSGMPPGPRAGFSMCVHKRRALLFGGVVDIEVEGDVMMSLFLNELYGFQLDTNRWYPLELRKEKSTKDKLKKAEQSCPDDVNKKINSACTTREETVDSEDEESSIDDISKNITSNMSIVDSENHTNSDGKSKESGAKLDIQSSLPEVVKPCGRINACMAVGRDTLYIYGGMMEIKDQEITLDDLYSLNLSKLDEWKCIIPWCSSTANALIVATDAATEKCNTMAVQIVAMGRYSMSYYRFKASESEWVEASEDDEEDEDGDEDESDESSTNEDDDEEEEEEEVSYIIKLALPFDHYQAQNASVEVGDAVALIKGVGKNLRRKERRSRIEQIRASLGLSDSQRTPMVMHC 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01395 461 MobiDBLite consensus disorder prediction 360 393 - -
Vimu10g01395 461 MobiDBLite consensus disorder prediction 228 249 - -
Vimu10g01395 461 Gene3D - 18 199 IPR015915 GO:0005515
Vimu10g01395 461 SUPERFAMILY Kelch motif 30 310 IPR015915 GO:0005515
Vimu10g01395 461 Pfam Galactose oxidase, central domain 270 310 - -
Vimu10g01395 461 Pfam Kelch motif 59 121 - -
Vimu10g01395 461 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 29 450 - -
Vimu10g01395 461 MobiDBLite consensus disorder prediction 359 393 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01395 26 167 Acyl Lipid Metabolism Gene Families AT3G05420 28.289 7.97e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01395 - - vum:124844811 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01395 10 14758732 14763982 Vimu10g01395 10 14758732 14763982 ECH