Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01391 ATGGAGAAAGCCCTAAACGAGGCCGTTTCCAAGAGCTTTGTGGGCTCCTACTTCAAGTTGGAACAGAGGAAAAGTTGCTTCACAAGGGAGCTTCGTGCTGCCATCGCAACTTTTCTCACCATGGCTTACATCATCACCGTCAACGCCACCATCATCGCTGCCTCCGGCGGAACATGCTCCGTCGCCGACTGCTCCTCTCCGGCGGGCCCAGACTGCAGGGTGAAGCCCAACGTTGGGTACGAGACTTGTCTTGCCAAGACCAAGAGTGACTTGGTTGTGGCCACTGCCGTTTCTGCTCTTGTTGGTTCTGTTGCCATGGGCCTGTTGGCTAACCTTCCTTTGGGTCTGGCTCCGGCCATGGGGCCCAATGCTTACTTGACTTTTAATTTGGTTGGTTTTCATGGAACCGGGTCAATCTCGTATCAAACTGCATTGGCTGTGTTTTTGGTTGAGGGTTGTGCTTTTCTGTTTATATCTGCTGTTGGGTTGAGGGGGAAGCTTGCCAAGCTCATCCCTCATTCAGTGAGGCTCGGCTGCGCAGCTGGGATTGGGCTTTTCATCGCCTTTACGGGCCTGCAGTCGAGCCTCGGCGTTGGGCTTATTGGGCCCGACCCTTCGAACCTGGTTACCATCACGGCCTGCAAGATGGTGGACCCAGAAACCGGGGCGTGCTTGGGTGGGAAACTGCAAAGCCCAAAGTTCTGGCTGGGCATTGTGGGGCTCCTGATTACGAGCTATGGGCTGATGAAGAATATAAAGGGAAGCATGATCTATGGCATTGTTTTTGTGACTTTTGTGTCTTGGTTTAGGCACACAGAAGTTACTTATTTTCCTGACACCCCAGTTGGTGATGAAAGTTATGAGTATTTCAAGCAAGTGGTTGGTTTTCACAAGATTGAATCAACTGCTGGAATGATGAGTTTTAGTGATTTTAACGAAAAGGGAGTTTGGGTGGCTTTGGGTACTTTGTTCTATGTTGATGTGCTTGCGATCACTGGGACTATGTACACGATGGCAGAGATTGGTGGGTTTTTGGATGAAAAGGGGCATTTTGAAGGTGAGTACGTGGCTTACATGGTTGATGCAGGAAGCACGATTGTGGGTTCTGCATTGGGTGTGTCAAGCACAGCAACATTTGTGGAATCATCAGCTGGTTTGAGAGAAGGAGGTCGAACTGGACTAACAGCAGTTTTTGTTGGCTTCTTCTTCTTCTTGTCATTGTTTTTTACTCCTCTCTTGTCTAGTGTTCCTCCTTGGGCTATAGGACCTTCACTTGTGATGGTTGGAGTGATGATGATGAAGGTGGTGAAGGACATAGATTGGAACAACACCAAGGATGCTGTGCCTGCTTTTGCCACAATGCTCCTCATGCCTCTCACATATTCCATAGCAAATGGAATCATTGCTGGGATTGGACTCTACATTGCTCTCAGCCTCTATGATTATGCTGCAAGCATTGTACATTGGTTGAGGAAGATGAAGAGAATGGTGGCCAAGGAACAAAACCAAGTTTCTGCTACTGCACCAGTGGAAATAATATGA 1542 0.487 MEKALNEAVSKSFVGSYFKLEQRKSCFTRELRAAIATFLTMAYIITVNATIIAASGGTCSVADCSSPAGPDCRVKPNVGYETCLAKTKSDLVVATAVSALVGSVAMGLLANLPLGLAPAMGPNAYLTFNLVGFHGTGSISYQTALAVFLVEGCAFLFISAVGLRGKLAKLIPHSVRLGCAAGIGLFIAFTGLQSSLGVGLIGPDPSNLVTITACKMVDPETGACLGGKLQSPKFWLGIVGLLITSYGLMKNIKGSMIYGIVFVTFVSWFRHTEVTYFPDTPVGDESYEYFKQVVGFHKIESTAGMMSFSDFNEKGVWVALGTLFYVDVLAITGTMYTMAEIGGFLDEKGHFEGEYVAYMVDAGSTIVGSALGVSSTATFVESSAGLREGGRTGLTAVFVGFFFFLSLFFTPLLSSVPPWAIGPSLVMVGVMMMKVVKDIDWNNTKDAVPAFATMLLMPLTYSIANGIIAGIGLYIALSLYDYAASIVHWLRKMKRMVAKEQNQVSATAPVEII 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01391 513 PANTHER XANTHINE/URACIL PERMEASE C887.17-RELATED 2 504 IPR045018 GO:0015205
Vimu10g01391 513 Pfam Permease family 87 466 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01391 Vimu-Chr10 14742079 14743620 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01391 K06901 - gmx:100808299 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01391 10 14742079 14743620 Vimu10g01391 10 14742079 14743620 ECH