Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01385 ATGGTTAGGGCTCGTGAGAACTGGGAGAAGCTGGTTCGAGCGACACTGAAGAGGGAGCAGCTAAGGAATGCAGGCCAAGGACACGCCAGAGTCCCCAGCGGAATCGCCGGCGCGGTTCCTCCGTCCCTCGCGCAAACCACAAACATTGATTTGATCTTGCAGGCCGCCGATGAAATTCAATCGGAGGATCCTAACGTTGCTAGGATCTGTAGTGTTATCTTGAAGTTAGCTTTAGGTGTAAGGGGAGTGAGGGAGTCTCTTCTAGGAGCATATAGTATGGCTCAAAATCTGGATCCCAACAGTCATGGTAGGGGAGTTTTACAATTCAAGACTGGTTTAACGTCTGTAATCAAGCAAAAACTTGCTAAGAAGGATGGGGTTCGGATTGATCGCAATCGTGACTTGGAAAACCTTTGGAAGTTTTATCTTCACTACAAGCAACGTCATAGAGTGGATGACATTCAACGAGAAGAACAGAGATTGCAAGAATCTGGAAATTTTAGCTCCTCATTGGGAGAGTTGAAGCTTAGATCATCTGAAATGAGAAAGATCATTGCTACGCTACGGGCTTTAGTGGAGGTCCTGGAGGCACTTAGTAAGGATGCTGATCCCAACGGAGTTGGAGGACTCGTAGTGGAGGAGTTGAGAAAATTAAAGAAGTCAAGTGTGACATTATCTGGAGAGCTTACACCATACAATATTATTCCTCTGGAAGCCCCATCATTAACCAATCCTATCAGAATTTTCCCTGAATTTCTAAAGCTGAGGTTTGGTTCTCAATATCAGGTTAAAGCAGCAATATCTGCAATTAGGTATACTGATCAGTTACCTAGACTTCCTGCTGGATTTAAAATATCTGGACAAAGGGATGCAGACTTGTTCGATCTTCTAGAATTTGTGTTTGGTTTTCAGAAAGACAATGTAAGGAACCAGCGTGAAAATGTTATCTTGATGATAGCAAATAAGCAGTCTAGACTTGGAATACCTGCTGAAACTGATCCAAAAATAGATGAGAAAACAATCAATGAAGTATTCTTGAAGGTGCTAGATAACTATATCAGGTGGTGCAGATACTTGAGAATTCGTCTTGCTTGGAATAGTTTAGAGGCTATTAACCGGGATAGGAAACTTTCTTTGGTTTCCTTGTATTTTCTTATTTGGGGTGAAGCTGCAAATGTCCGTTTTCTTCCTGAGTGTATATGCTTTATATTCCACAATATGGCCAAAGAGTTGGATGCTATTTTGGATCATTCAGAAGCTGCACCTGCAGTCAGCTGCGTAACTGATGACGGTTCTGCAAAATTTCTTGAGAAAATAATTTGTCCCATATATGACACGCTAGCTGCAGAAGCTAGTAGAAACAACAATGGGAAAGCTGCACATTCAGCATGGAGGAATTATGATGACTTCAATGAATACTTTTGGTCGCCTGCTTGTTTTGAATTAAATTGGCCAATGAGACCTGATTCTCCATTCTTGCGGAAACCTACACCTTCAAAAAGGTCAAAAAGGACTGGTAAAAGCAGTTTTGTTGAGCATAGGACATTTCTTCACCTGTATCGAAGCTTCCATCGACTTTGGATCTTCTTGGCACTAATGTTTCAGGCTTTGACTATCATTGCTTTCAATCATGGACATATCAATGTGGATACTTTTAAAACAATACTTAGCATTGGGCCATCATTTGCTATCATGAATTTTTCCAAAAGTTTCTTAGATGTGTTACTTACATTTGGGGCATACACGACTGCAAGGGGGATGGCTGTATCAAGACTAGTGATAAGGTTTTTTTGGGGTGGCTTGACTTCTGTTGCTGTAACATATCTTTACCTGGCATTGATTCTTCCATCTGCCCTTCCTACCAAAACCTTCATTCTTCCTTCCAGTACTAGCCCGTTCGGTTCTGACAGTTTCCTCACTGTCGGTTCTGGCCGTCCTCTCCTCTTCGGCTTGGTAGGTCCTCTTTCTTTAGGTTCCGCCCATTCTCTCACGTTCGGATCCAACAGTCTGCAACCGAAAGTTTTGCAAGAGAGAAATAGTCGTAACACTGATAATTCATTCTATTTCCGGATATACCTTCTTGTTCTTGGTGTTTATGCTGGAGTACGACTATGCTTTGCACTGTTGCTCAAATTTCCAGCTTGTCATGCACTTTCAGAAATGTCTGATCAGTCATTCTTTCAGTTTTTCAAATGGATTTATCAAGAACGATATTATGTTGGACGTGGTCTTTATGAGGGAATAAGTGATTACTGCAGTGCTGCTTCTGTGATATTGATTTTTCAACTGTTATTTCACTCATCTGTTTTAAGTGCCGCAGACAATAACAATGCCTTGACTATTGTTAGCTTGTGGGCTCCTGTTGTGGCTATTTATCTCATGGATATTCTGATTTTTTACACTGTCATGTCAGCGATTGTTGGTGGTGTGATTGGTGCACGGGCTCGGCTAGGCGAGATTCGTTCAATTGAAATGGTGCATAAGCGTTTTGAAAGTTTCCCTGGGGCCTTTGTAAAAAATTTGGTGTCACCACAAATAAAAAGGATTCCCTTGAGCGGACAATCAACCCAGATATGGGCTACAAATGTGGATTTAGGAGAAGTCAGACTTTGCACATTGGCACATGTGATTAATGGTCAAAGTGAGTGGCATGGCGAACAAAGGGGAAGGAGGCGTTTAGGCTTTATGAGGTGGCCTAGGGATTCTCAAGATTTGAACAAAACATATGCTGCTATGTTTGCTCCATTTTGGAATGAGATAATAAAATGTCTGCGTGAGGAAGATTTTATTAGTAATAGAGAAATGGACCTGCTTTCTATGCCTAGTAATGCAGGAAGTCTGAGATTAGTTCAATGGCCTCTGTTTCTTCTTAGCAGTAAGATCTTGTTGGCGATTGACTTGGCTTTAGACTGCAAAGATACTCAGGCAGATTTGTGGAACAGGATAAGTAGGGATGAATACATGGCCTATGCAGTGACGGAATGCTATTACAGTGTTGAAAAAATATTATATTCATTAGTTGGCAACGACAATGAAGGAAGACTTTGGGTGGAAAGAATTTTTCGTGAGATCAATAACAGTATTGTAGAGGGTTCACTTGTTTTAACCTTGTCTTTAAAGAAGCTTCCAGTTGTTTTATCAAGACTTACAGCACTGTCTGGACTCCTGATTCGAAATGATCCTGAACTTGCTAAAGGTGCTGCAAAAGCTGTACATGACCTGTACGAAGTTGTAACTCACGAACTGGTTTCCTCTGATTTAAGGGAGAATCTTGATACGTGGAACCTTTTAGCCAGAGCTAGGGATGAGAGACGACTTTTTTCTAGGATAATTTGGCCTAATGATCCAGAAATTAAAGAGCTTGTGAAGCGGTTGCATCTTCTTCTTACAGTAAAGGATTCAGCTGCAAATATTCCAAAAAATCTTGAAGCCAGGAGAAGATTAGAGTTTTTCACAAATTCATTATTTATGGATATGCCTTCAGCAAAGCCTGTTAGTGAAATGTTGCCGTTCAGTGTTTTCACTCCATACTATAGCGAAACTGTGCTTTACGGGACTTCCGAATTGCAAAAGGAGAACGAAGATGGAATATCTACTCTTTTCTATCTTCAAAAGATATTTCCAGATGAATGGGAAAACTTTCTTGAAAGAATTGGTCGAGGAGCATCCACTGGGGATGCAGAACTTCAAGAAAGTTCCAGTGATGCCTTGGAACTTCGTTTTTGGGCTTCTTATCGAGGGCAGACTCTTGCTAGGACAGTGCGTGGTATGATGTACTATAGGAGGGCTTTAATGCTGCAGAGTTTTCTGGAGAGCAGATCACTAGGAGTGGACAATTATCCTCAAAACAACTTCATTACAAGTCAAGATTTTGAATTATCTCGTGAATCACGGGCACAAGCAGATTTGAAGTTTACTTATGTTGTATCATGCCAAATTTATGGTCTGCAAAAGCAGCGGAAGGCAGCAGAGGCTGCAGATATTGCTTTATTGTTACAGAGGAATGAGGCACTTCGAGTTGCTTTTATTCATTCTGACGAACCATCTGATGCAAATAGTTCAAAAGTGTTTTATTCAAAGCTTGTCAAAGCTGATATAAATGGAAAAGATCAGGAAATATATTCTATTAAACTTCCTGGAGATCCAAAGCTTGGAGAAGGAAAACCTGAAAATCAAAACCACGCAATAATTTTTACTCGTGGTGAAGCTGTTCAAACTATTGACATGAATCAGGACAATTATCTTGAGGAAGCAATGAAAATGAGAAATCTTCTGGAGGAGTTTCATGCGAATCATGGCCTTCGCCCTCCAAGCATTCTTGGAGTAAGGGAACATGTTTTTACAGGAAGTGTTTCATCGTTGGCTTGGTTCATGTCAAATCAAGAAACTAGTTTTGTAACCTTGGCACAACGAGTTTTAGCCAATCCTCTCAAAGTTCGTATGCACTATGGACACCCAGATGTATTTGACAGAATATTTCACATAACTCGAGGAGGGATTAGTAAGGCATCCCGTGTTATTAATATTAGTGAAGATATATATGCTGGTTTCAATTCCACATTGCGGCTTGGAAATATCACACACCATGAATACATTCAGGTTGGAAAAGGAAGGGATGTTGGGTTGAATCAGATCGCACTCTTTGAGGGAAAAGTGGCTGGTGGTAATGGAGAGCAAGTTCTTAGCAGGGATATTTACAGGCTTGGACAACTTTTTGATTTCTTCAGAATGCTTTCTTTCTTCTTCACAACTGTGGGTTATTATGTCTGCACCATGATGACAGTTCTTACCGTATATGTATTCTTATATGGAAGAGCATACCTGGCATTTTCTGGTCTTGACGAAGCTGTCTCAGACAAGGCAAAATTGGCGGGTAACACAGCACTTGATGCAGCTTTGAATGCTCAATTTTTGGTTCAGATTGGCGTTTTTACTGCAGTACCAATGATAATGGGTTTTATACTTGAGTTAGGACTGCTGAAGGTTTGTGATGCCAAGAATGGCATTGGTTGGCACATCGCAACTTCTTTAAGCAATATTGAGGATATTGTTTTGGTGAAGGGTTCCTGGCTATTTTCAGTTTCATCACAATGCAACTACAGTTGTGTTCTGTCTTCTTCACGTTCTCATTGGGAACTAGAACTCACTATTTTGGACGTACCATTCTCCATGGAGTATCGAGCTACTGGTAGAGGCTTTGTTGTCCGTCACATAAAGTTTGCTGAAAATTACAGATTATATTCTAGGAGTCACTTTGTCAAAGCGCTTGAAGTGGCATTGCTTCTTATAGTTTATATAGCATATGGGTATGCAGAGGGAGGTGCTGTTACCTATGTTTTGGTAACTCTTAGCAGTTGGTTCCTTGTCATTTCTTGGCTTTTTGCACCTTACATTTTCAATCCCTCTGGTTTCGAGTGGCAAAAGACTGTGGAAGATTTTGATGATTGGACAAGTTGGCTTCTTTACAAAGGAGGCGTAGGGGTAAAAGGAGAAAATAGTTGGGAGTCTTGGTGGGACGAAGAACAGATGCATATCCAAACTTTGAGGGGTCGGATTTTGGAGACAATTTTAAGTGCAAGGTTCTTCTTGTTTCAGTATGGTATTGTGTATAAGCTCCATCTTACTGGAAAAGATACATCGCTTGCGGTATATGGATTTTCGTGGGCTGTCTTGGTTGGAATTGTCTTGATATTTAAGATCTTTACCTATAGCCCAAAAAAGTCAGCCGATTTTCAGCTAGTGTTGAGATTTTCCCAGGGAGTCGTATCTATCGGCCTTGTTACAGCTGTGTGTCTTGTTGTTGCCTTTACTAGACTGTCAATAGCTGACCTTTTCGCAAGCATCCTTGCATTTATCCCTACTGGATGGGGAATATTGTCTGTAGCAATTGCGTGGAGGAAGATAGTTTGGAGTCTCGGATTGTGGGATTCTGTCCGTGAGTTCGCTAGAATGTATGATGCTGGAATGGGTGTGATCATCTTTGCACCAATAGCATTTTTATCATGGTTTCCTTTCATTTCCACTTTCCAATCTCGCCTTCTGTTCAATCAAGCCTTCAGCCGTGGTCTTGAAATCTCTCTCATCCTTGCTGGAAATAAAGCCAATGTTGAGGCTTAG 6117 0.4097 MVRARENWEKLVRATLKREQLRNAGQGHARVPSGIAGAVPPSLAQTTNIDLILQAADEIQSEDPNVARICSVILKLALGVRGVRESLLGAYSMAQNLDPNSHGRGVLQFKTGLTSVIKQKLAKKDGVRIDRNRDLENLWKFYLHYKQRHRVDDIQREEQRLQESGNFSSSLGELKLRSSEMRKIIATLRALVEVLEALSKDADPNGVGGLVVEELRKLKKSSVTLSGELTPYNIIPLEAPSLTNPIRIFPEFLKLRFGSQYQVKAAISAIRYTDQLPRLPAGFKISGQRDADLFDLLEFVFGFQKDNVRNQRENVILMIANKQSRLGIPAETDPKIDEKTINEVFLKVLDNYIRWCRYLRIRLAWNSLEAINRDRKLSLVSLYFLIWGEAANVRFLPECICFIFHNMAKELDAILDHSEAAPAVSCVTDDGSAKFLEKIICPIYDTLAAEASRNNNGKAAHSAWRNYDDFNEYFWSPACFELNWPMRPDSPFLRKPTPSKRSKRTGKSSFVEHRTFLHLYRSFHRLWIFLALMFQALTIIAFNHGHINVDTFKTILSIGPSFAIMNFSKSFLDVLLTFGAYTTARGMAVSRLVIRFFWGGLTSVAVTYLYLALILPSALPTKTFILPSSTSPFGSDSFLTVGSGRPLLFGLVGPLSLGSAHSLTFGSNSLQPKVLQERNSRNTDNSFYFRIYLLVLGVYAGVRLCFALLLKFPACHALSEMSDQSFFQFFKWIYQERYYVGRGLYEGISDYCSAASVILIFQLLFHSSVLSAADNNNALTIVSLWAPVVAIYLMDILIFYTVMSAIVGGVIGARARLGEIRSIEMVHKRFESFPGAFVKNLVSPQIKRIPLSGQSTQIWATNVDLGEVRLCTLAHVINGQSEWHGEQRGRRRLGFMRWPRDSQDLNKTYAAMFAPFWNEIIKCLREEDFISNREMDLLSMPSNAGSLRLVQWPLFLLSSKILLAIDLALDCKDTQADLWNRISRDEYMAYAVTECYYSVEKILYSLVGNDNEGRLWVERIFREINNSIVEGSLVLTLSLKKLPVVLSRLTALSGLLIRNDPELAKGAAKAVHDLYEVVTHELVSSDLRENLDTWNLLARARDERRLFSRIIWPNDPEIKELVKRLHLLLTVKDSAANIPKNLEARRRLEFFTNSLFMDMPSAKPVSEMLPFSVFTPYYSETVLYGTSELQKENEDGISTLFYLQKIFPDEWENFLERIGRGASTGDAELQESSSDALELRFWASYRGQTLARTVRGMMYYRRALMLQSFLESRSLGVDNYPQNNFITSQDFELSRESRAQADLKFTYVVSCQIYGLQKQRKAAEAADIALLLQRNEALRVAFIHSDEPSDANSSKVFYSKLVKADINGKDQEIYSIKLPGDPKLGEGKPENQNHAIIFTRGEAVQTIDMNQDNYLEEAMKMRNLLEEFHANHGLRPPSILGVREHVFTGSVSSLAWFMSNQETSFVTLAQRVLANPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRLGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMLSFFFTTVGYYVCTMMTVLTVYVFLYGRAYLAFSGLDEAVSDKAKLAGNTALDAALNAQFLVQIGVFTAVPMIMGFILELGLLKVCDAKNGIGWHIATSLSNIEDIVLVKGSWLFSVSSQCNYSCVLSSSRSHWELELTILDVPFSMEYRATGRGFVVRHIKFAENYRLYSRSHFVKALEVALLLIVYIAYGYAEGGAVTYVLVTLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLLYKGGVGVKGENSWESWWDEEQMHIQTLRGRILETILSARFFLFQYGIVYKLHLTGKDTSLAVYGFSWAVLVGIVLIFKIFTYSPKKSADFQLVLRFSQGVVSIGLVTAVCLVVAFTRLSIADLFASILAFIPTGWGILSVAIAWRKIVWSLGLWDSVREFARMYDAGMGVIIFAPIAFLSWFPFISTFQSRLLFNQAFSRGLEISLILAGNKANVEA 2038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01385 2038 Pfam 1,3-beta-glucan synthase component 1138 1936 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Vimu10g01385 2038 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 259 2031 - -
Vimu10g01385 2038 SMART FKS1_dom1_2 374 487 IPR026899 -
Vimu10g01385 2038 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 376 484 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01385 Vimu-Chr10 14652074 14714207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01385 1 2038 Glycosyltransferase AT2G36850 66.651 0.0 2740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01385 K11000 - gmx:100777959 3154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01385 10 14652074 14714207 Vimu10g01385 10 14652074 14714207 ECH