Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01375 ATGGCTGATGATAATCACCCTAGAGTGAGACTGCTATGCCGCCCGAAGCAACTCAACACCAAAGGATCCGACCCGGGAGTCCATTTCTGGCTCGTTGGATCCCCGTTCCTCCCGCCGCTCACCGTCGCTTCCTTTCTCCGATGTATCCATTCTCTCCCCTCCTCCTCCTCGCCCGATTTCCACAAGGAATCGGAGGACCTGCGCACACTCCTCCCTAAAGGCTTTGAACTCATCGGAGCGGTAGCCTCCGGCGAGGATTCCGACGCTCGTGCGGCCGTGGACGCTGCTCGTTCATTACGGAAACTTCTCTATCGGGAAGGAATGGATCGCCCGCTGATTGGAGCTGTTTGCGGTTCAGATTCTGGCGATCTGCGGTTTTTTGTGTCTGAGAGTGGGAATGCGACTAGCCTTGAGGCTGTTCCATCGGTAATAGAGGAACGGGATTCGGAGAAGTGTTTGTGGGAGAATGCTTGCCTGCTTCGTTGTGAGCTTCCCATTAAGTTGCCAGTCTATTATGCTCTCAAAAATCCAACCGATGTTGAGAAGGCATATGTACAAGCTGTTGAAGCTCTTATTGCCAAGTTAAGAGACCCTCAGGCTGTGTACATGTTAGAAACAACAAACAAAACCTCTCTGGATATACCTCTTCCTGTCATAATTAGAGGTGTACAATTAGACTTTTATGCAGACCTCTCCAAGATCAAGACTTTGGCTGAAGATGATGACGGCTCCGATGCAAGCTCACTATCATGTTCATACTTTTCCAATCGCAGTAAAGCAGGCTCACCAGTTTTTTCTGCAGAGAATGCAGATACTATTCAAGTTAGTGTTCTCTTTAATAGCTTCGGGACATCATCAGCTTCTACTGTACCTTTTGCAGAATACTTTCCAGTTGAGGAGGAAGCTAGACTCCTTGTTGTGGATATTAAGCTAGATGTACTCTGCTATTCTTCCAGGGAGCTTCCACTAAAATATGCAGTTTCAAGTTTAATCATACCTGGCTTAGTTGACCAGTTAAATACAGTGCAAAAGTTAATGTTGCCTAACCTTTTGGCACAACTTCCCCAGCCAAAATCTTATCACTTCAGTCCTTCTGGTATTCTGCATCCAATAACTGTTTTCTATGAACTAAGTTTTGGGGAGACAGAAATGAAGCAAGTTGAAGTTAGGAGATCCCTGCACTCAAGGTTGGGATTACCCTATGATCGTCCCCTTCTTAGAATTTCTAATGCCTTGGATTTTTCAAAAGTCAAGAGCAATGGGATGATCTCTCTACAGAAAGGTTCAACTTTGCTCAGAGATGTCCACTTTGGGATTCCAAGTAGTGGGGTTACGGGGGGAACTGTTTCCCTTGTTCAAGGTTCATATGAATACTTCCATTATCTTCATGAAGGTTATAATGATTCGTGTAGTGTATTTAGCGAGGCAGGGGGTGTAATTGTGATTGGTTGGGATAAGGGATGGGGTTGTGCATACCGCTCTCTCCAGACTATTATTTCATGGTTCAGACTTCAAAACTACACGTCCATAGAAGTTCCTTCTCATAGGGAAATACAGCAGACACTTGTTGAGATTGGTGATAAAGACCCTTCTTTTATTGGATCAAGAGAATGGATAGGTGCAATTGAATTGAGCTTTGTTTTGGACAAACTTTTGGGTGTTACATGCAAAGTCATCAATGTTAGATCTGGATCTGAGCTGCCGGAAAAATGTCGAGAGCTAGCATTGCACTTTGAGAACCAAAATACACCAGTTATGATTGTGATCACATGTACTAGATCGTTTATAGAGGACAAGCCAAATGAGCATTTCTTCCCATTTGCTACAAAGGATTGTGTTTCCAGTAAAGACAAGACTTCATGCAAATGGGACAAATGTGTGCTCCAATCTAGACCACGCAAATTGGGTAGTAATGGAGGCTTCATGAGACTGGAGCTTGAGCTTAATAACTGCGAGCTCAGTAGCTCAATAATATGGATGGAGGGGAAGAGAAAGGAGTCAGAGTGGATTGAACAGATTGGTGGTGGTGTACTAGCATATACACTCTTGGGAGTAGATTACAATGAAGCAAGTGGAGACTGTGCATTTTTAATACTTGATCCCCACTATACAGGTTCGGATGATCTAAAGAAAATAGTGAATGGGGGATGGTGTGGGTGGAAAAAGGCTGTTGATAACAAGGGAAAGAATTTCTTCTTGCACGATAAGTTCTATAATCTACTATTGCCCCAAAGACCCAACATGGTCTGA 2250 0.4418 MADDNHPRVRLLCRPKQLNTKGSDPGVHFWLVGSPFLPPLTVASFLRCIHSLPSSSSPDFHKESEDLRTLLPKGFELIGAVASGEDSDARAAVDAARSLRKLLYREGMDRPLIGAVCGSDSGDLRFFVSESGNATSLEAVPSVIEERDSEKCLWENACLLRCELPIKLPVYYALKNPTDVEKAYVQAVEALIAKLRDPQAVYMLETTNKTSLDIPLPVIIRGVQLDFYADLSKIKTLAEDDDGSDASSLSCSYFSNRSKAGSPVFSAENADTIQVSVLFNSFGTSSASTVPFAEYFPVEEEARLLVVDIKLDVLCYSSRELPLKYAVSSLIIPGLVDQLNTVQKLMLPNLLAQLPQPKSYHFSPSGILHPITVFYELSFGETEMKQVEVRRSLHSRLGLPYDRPLLRISNALDFSKVKSNGMISLQKGSTLLRDVHFGIPSSGVTGGTVSLVQGSYEYFHYLHEGYNDSCSVFSEAGGVIVIGWDKGWGCAYRSLQTIISWFRLQNYTSIEVPSHREIQQTLVEIGDKDPSFIGSREWIGAIELSFVLDKLLGVTCKVINVRSGSELPEKCRELALHFENQNTPVMIVITCTRSFIEDKPNEHFFPFATKDCVSSKDKTSCKWDKCVLQSRPRKLGSNGGFMRLELELNNCELSSSIIWMEGKRKESEWIEQIGGGVLAYTLLGVDYNEASGDCAFLILDPHYTGSDDLKKIVNGGWCGWKKAVDNKGKNFFLHDKFYNLLLPQRPNMV 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01375 749 ProSiteProfiles Rhodanese domain profile. 711 729 IPR001763 -
Vimu10g01375 749 Gene3D - 429 749 - -
Vimu10g01375 749 PANTHER UFM1-SPECIFIC PROTEASE 2 71 469 - -
Vimu10g01375 749 Pfam Peptidase family C78 485 741 IPR012462 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01375 K01376 - gmx:100819651 971.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01375 10 14506326 14519336 Vimu10g01375 10 14506326 14519336 ECH