Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01361 ATGGCTGCCACTGGAGGTCATGAGGCTCACAACAACCCTGCTCTTGACCCGGATTTCGATATTCCGGATACTCCGGATCTCCAGTTCGCTGAGTTCGGATCGGGTTGTTTTTGGGGAGCGGAGTTGGCCTTTCAGCGAATTCTGGGAGTCGTAAAGACCGAGGTCGGATATACTCAGGGCCACACACCTGATCCAGATTACAAACTGGTTTGCACCGGAACCACTAACCACGTTGAAGTGGTTCGGGTTCAGTTCGACCCGAAGGTTTCCCCCTACACGGATCTGCTTGCTCTGTTTTGGTCTCGACATGACCCAACTTCCATCAACCGCCAGGGCAATGATGTGGGTGCACAGTATAGATCAGGAATATACTACTACGACGAAGAGCAGGCTCGTTTAGCCCAGGAATCGAAAGAAGCAAAACAGTTGGAGTTGAAGGAGAAGATTGTGACAGAAATTCTTCCAGCTAAGAGGTTTTACAAAGCAGAGGACTACCATCAGCAATATCTGGAGAAGGGTGGAGGAAAAGGTGAAAGCAACAAACAGTCAGCAGATAAAGGTTGCACTGATCCCATCAGGTGCTATGGCTGA 591 0.4975 MAATGGHEAHNNPALDPDFDIPDTPDLQFAEFGSGCFWGAELAFQRILGVVKTEVGYTQGHTPDPDYKLVCTGTTNHVEVVRVQFDPKVSPYTDLLALFWSRHDPTSINRQGNDVGAQYRSGIYYYDEEQARLAQESKEAKQLELKEKIVTEILPAKRFYKAEDYHQQYLEKGGGKGESNKQSADKGCTDPIRCYG 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01361 196 Pfam Peptide methionine sulfoxide reductase 31 173 IPR002569 GO:0008113
Vimu10g01361 196 Gene3D Peptide methionine sulphoxide reductase MsrA 18 196 IPR036509 GO:0008113
Vimu10g01361 196 MobiDBLite consensus disorder prediction 1 20 - -
Vimu10g01361 196 NCBIfam peptide-methionine (S)-S-oxide reductase MsrA 30 172 IPR002569 GO:0008113
Vimu10g01361 196 MobiDBLite consensus disorder prediction 171 196 - -
Vimu10g01361 196 Coils Coil 126 146 - -
Vimu10g01361 196 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 27 184 IPR002569 GO:0008113
Vimu10g01361 196 FunFam Peptide methionine sulfoxide reductase 16 196 - -
Vimu10g01361 196 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE 10 195 - -
Vimu10g01361 196 SUPERFAMILY Peptide methionine sulfoxide reductase 24 174 IPR036509 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01361 Vimu-Chr10 14316275 14316997 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01361 K07304 - gmx:100527085 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01361 10 14316275 14316997 Vimu10g01361 10 14316275 14316997 ECH