Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01355 ATGGGTGGCGTGACTTCTTCAATGGCGGCGAAGTTGGCGTTTTTCCCTCCGAGTCCGCCGTCCTACAAGCTGCTGAAGGAGGAGGCCACGGGGCTGCTGCTCATGGAGCCTTTCCCGCACCGCGAGAACGTGGAGGTTCTCCGCTTCCCCAACCGCCGAGGCACGGAGATCGTCGCCGTCTACGTTCGCCATCCCAACGCTAAGTCCACCGTCCTTTACTCCCACGGTAATGCAGCCGATATTGGTCAGATGTACGAGCTCTTCGTCGAGTTGAGCATCCACCTCCGCGTCAATCTCATCGGTGTAAGTTTGAACCGGATTTTCGTCGAAGGAGATACTTGTGGGGAAACAAAAAGGAATATGCCGACTGAGTGGGATGAATGTGAAAGTTTATATGTTACTAACGTTTTCAAGCATATCGTATCAAACACATGCAGATATGATTATTCTGGCTATGGACAGTCATCAGGGAAGCCAAGTGAGCATAATACTTATGCTGACATTGAAGCTGTATATAAGTATCTTGAAGAGAACTATGGTGCTAAGCAGGAAGATATCATCCTTTATGGTCAGTCTGTTGGAAGTGGTCCTACTTTGGATCTTGCTTCCCGTTTACCCCGACTAAGGGCTGTTGTTCTCCACAGTCCTATACTATCAGGATTGAGAGTCATGTATCCTGTGAAACGGACATATTGGTTTGACATTTATAAGAACATTGATAAAATTCCATTGGTGAAGTGTCCGGTGCTAGTAATTCATGGAACTGCTGATGAGGTTGTTGATTGCTCTCATGGCAAGCAGTTGTGGGAGCTGTGTCAACAGAAATACGAACCTTTATGGCTCAAAGGAGGAAATCACTGTAATTTGGAACTCTATCCTGAATACTTACGACATCTCAGAAAATTCATATCCTCGGTAGAAAAGCCACCGTCCCAAAGAGTGAGTTTCAGGAGAAGCGTAGATAGAGTTGAACAATCCAGAGGAAGTACTGATTGCTTTGAAACACCGAGGAAGAGTACCGATCAAAGGGACAAACCAAGGAAAAGCACTGATAGGACAGAAAAGATGAAATTTCATGAATTCAAATTCAATAATACTGAAAAGTTAGAGAAAATAAGAGTGCAATTTGATCAGATGGAGAGGTCCCGAAGAAGCGTAGAGTACAATGATAAATCAAGAAGCATTGAGTTCCAAGATAAATCCAGGAGAAGTGTGGATGTTCAGTTTGAGAGGCCACGGAAGAGCATTGATTGGCTGGATAGAATTCGTGCAAGCTGA 1278 0.4507 MGGVTSSMAAKLAFFPPSPPSYKLLKEEATGLLLMEPFPHRENVEVLRFPNRRGTEIVAVYVRHPNAKSTVLYSHGNAADIGQMYELFVELSIHLRVNLIGVSLNRIFVEGDTCGETKRNMPTEWDECESLYVTNVFKHIVSNTCRYDYSGYGQSSGKPSEHNTYADIEAVYKYLEENYGAKQEDIILYGQSVGSGPTLDLASRLPRLRAVVLHSPILSGLRVMYPVKRTYWFDIYKNIDKIPLVKCPVLVIHGTADEVVDCSHGKQLWELCQQKYEPLWLKGGNHCNLELYPEYLRHLRKFISSVEKPPSQRVSFRRSVDRVEQSRGSTDCFETPRKSTDQRDKPRKSTDRTEKMKFHEFKFNNTEKLEKIRVQFDQMERSRRSVEYNDKSRSIEFQDKSRRSVDVQFERPRKSIDWLDRIRAS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01355 425 MobiDBLite consensus disorder prediction 334 356 - -
Vimu10g01355 425 Pfam Serine aminopeptidase, S33 144 219 IPR022742 -
Vimu10g01355 425 SUPERFAMILY alpha/beta-Hydrolases 144 309 IPR029058 -
Vimu10g01355 425 Gene3D alpha/beta hydrolase 135 304 IPR029058 -
Vimu10g01355 425 PANTHER ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 8 308 - -
Vimu10g01355 425 MobiDBLite consensus disorder prediction 327 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01355 Vimu-Chr10 14268394 14271407 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01355 K01076 - gmx:100813072 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01355 10 14268394 14271407 Vimu10g01355 10 14268394 14271407 ECH