Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01347 ATGAGTAGTCGCCAGCTAGCACCAAAAATGTCCCAAAGGAAGGAGCGACGCATGTTCTCCACTTCTGATGACAGTGCCATGACCAAGCAGGTTCAGGCCACACATGCCCCAGATGGCCGTGAAATTGATGTCAAACCTATTCTACAAATCGTCGATGAAATTCTCCTTCGGTTCATTGCTCGCACTGTTGAGGGTTATGAAGTGAAAAGAGACCAAGATGCATTGGAGATGACTGCTGCTCTGGCAGAATTTGACATGCTTGACTCGCTGGCTTACATCATAAACAAAATTTCGTGTGAGCTATCATGCAAGTGTTCGGGAGGTGGAGATGCACATTCATCAACAATGGTGTTGCTGGGTTACATGTCTAGCTATGCATGGCATGCGAAAGTTGTGCTAACATTAGCAGCCTTTGCTGTTATTTTTGGAGAGTTTTGGCTTGTTGCTCAGTTGAGTGCTGAAAATACTCTTGCCAAGTCTGTGGCCCTTCTTAAGCAACTGCCAGATATTGCTGAGAATTTCATGTCATTGAAACCCCATTTTGAAGCACTCATTAGGCTGGTGAAGGCTGCAATGGATGTAACCACCTGCATCGTTGAATTCAAGGAGCTTCCATCTGAATACATTTCAGAGGACACACCTCCCATGTCTGTTGCCAGTACTCACATTCCTATTGCTTCCTACTGGGTCATCAGAAGTATTGTGGCATGTGCCTCTCAAATTGCTAGTCTCATAGGCACAAGAAATGAGTCCATTTCATCAACCACTGAGGCATGGGAGTTATCTAGTCTTGCTCACAAAGTTACTAGTATTCATGAGCACCTCAAGAGCCAACTGGTTCTTTGCTACCAATATATAGATGACAAGAGACATATAGAGGCATTCCATAATCTGATACGTCTTTTCGAGACAGTCCATATAGACAACATGAAAATTGTCAGAGCACTGATATACGCAAAGGATGATATCCTTCCACTTGTGGATGGAACTACAAAATCAAGGGTTAGTCTGGAGGTACTAAGGAGGAAACATGTGTTGCTGCTCATATCAGACCTTGATCTTTCACAAGAAGAGATCCTGGTACTTGATAATTTGTACAAAGATGCACGAGCGAGGGGTGACACACACTATGAGATGGTTTGGATCCCAGTTGTGGACAAAGGCATCTGGAATGAGGTGAACAAACAGAAGTTTGAGTATTTGCAGTCATTGATGCCATGGTACAGTGTCTGTGATCCTTTCATCATTGAACCATCAGCAGTTAAGTACATCAAAGAAGTGTGGAATTTCTCAAAGACAGCTATTCTAGTTGCCCTTGATCCACAAGGCAGATTGTCCTCCCCTAATGCAGTCCATATGATATGGATTTGGGGCAATTTGGCCTTCCCCTTCACAAGTGAGAAAGAAGAATCACTGTGGAAGCAAGAGATTTGGAGCCTTGAACTGCTTGTTGATGGCATTGATCCTACAGTTTTAGAATGGATGGCAGATGGAAAACTGGTATGTCTGTATGGAGGTGAAGACCTGGAGTGGATTGAGAAATTCACAGCAACAGCATTGAGTGTGGCAAAAGCTGGGAAGTTCCAGCTGGAGATGGCGTACGTGGGAAAGAGCAACGCGAAGGAGCGGATGCAGAAGATGATAAAAACGTTCACTACGAGAAAGTTCAGTTACTTTTGGCCCAACGTGACCTCCATTTGGTTCTTCTGGACCCGTTTGGAGAGCATGTTGTACTCCAAGTTGCAGCAAGGAAGGACGGTGGAAAACGACGAGATCATGAGCGAAGTGATGACTGTGTTGAGCTTCGACGGCAGTGATCGAGGGTGGGCGATTTTCTGCATGGGCGCCACTGAAATGGCCAGAGCCAAAGGTGACAGTGCTATTAAATGCTTGCAGGACTTCGAAAAGTGGGGGCCTAGAATCGAGGAAGATGGTGTGGTGAAAGCCATGAACGATTACCTCAACCAAAACAAACCCCCACATCACTGCAATCGTTTGATCCTTCCTGGGAGCACTGGTGGCATACCCCAGAAGGTTGTGTGTGCTGAATGTGGACGCCAAATGGAGAAATACTTCATGTATCGTTGCTGTGTTGAGTAA 2100 0.4529 MSSRQLAPKMSQRKERRMFSTSDDSAMTKQVQATHAPDGREIDVKPILQIVDEILLRFIARTVEGYEVKRDQDALEMTAALAEFDMLDSLAYIINKISCELSCKCSGGGDAHSSTMVLLGYMSSYAWHAKVVLTLAAFAVIFGEFWLVAQLSAENTLAKSVALLKQLPDIAENFMSLKPHFEALIRLVKAAMDVTTCIVEFKELPSEYISEDTPPMSVASTHIPIASYWVIRSIVACASQIASLIGTRNESISSTTEAWELSSLAHKVTSIHEHLKSQLVLCYQYIDDKRHIEAFHNLIRLFETVHIDNMKIVRALIYAKDDILPLVDGTTKSRVSLEVLRRKHVLLLISDLDLSQEEILVLDNLYKDARARGDTHYEMVWIPVVDKGIWNEVNKQKFEYLQSLMPWYSVCDPFIIEPSAVKYIKEVWNFSKTAILVALDPQGRLSSPNAVHMIWIWGNLAFPFTSEKEESLWKQEIWSLELLVDGIDPTVLEWMADGKLVCLYGGEDLEWIEKFTATALSVAKAGKFQLEMAYVGKSNAKERMQKMIKTFTTRKFSYFWPNVTSIWFFWTRLESMLYSKLQQGRTVENDEIMSEVMTVLSFDGSDRGWAIFCMGATEMARAKGDSAIKCLQDFEKWGPRIEEDGVVKAMNDYLNQNKPPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01347 699 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 9 698 IPR039299 GO:0010088
Vimu10g01347 699 Pfam Sieve element occlusion C-terminus 468 697 IPR027944 -
Vimu10g01347 699 MobiDBLite consensus disorder prediction 1 36 - -
Vimu10g01347 699 Pfam Sieve element occlusion N-terminus 22 306 IPR027942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01347 Vimu-Chr10 14184401 14188560 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01347 - - gmx:100811452 1328.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01347 10 14184401 14188560 Vimu10g01347 10 14184401 14188560 ECH