Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01332 ATGGCGCTGCGAAACGGCAGCAGAAAATTTTCCTTCGAGGTTCTCAGCGTCGATACCGAATCGGAATCAAACGAACACAGTCGCAGGAAACGCAGGCATCGCGCCTCCAAGCGCAAGAAGAAGCTTCTTGATCGCGCGGATTCCGTCGATCCGCATATAGAGCCTCTGGAAAACGGAGGAGCCTGCAACGGATTCGAGCTGGACGCTAATAGGTATAGCGCTGGTGGAGGGAGCGTCGTTTACGAGGAGGTGCGAGAGGCGAGTGTGTGCGCGGTTGTGGATGCTCGTGAGGCGGAGAATGAGGCACCGACGGCGGTGCGCGGTGGCATCGAGGGGTTTAATTTTGGGAAATTGAGGCAGAGGAACGTGAGTTGCGAAAGTTCCGATGATTTTCCGACTTCGGTGGTGCGCGATGAGAAGGAGGAGGGTGGTGTAAAGGCGAGTCCAGTGGAGAAACCGACGAACGAGCCTGACAGGAATGTGGCTACAAAATTGGAGACCGTGGAGTCGTTGGACTGGAAGCGTCTCATGGAGGAAGATCCGAATTACGTATTTTCAGTGGAAAAGTCTCCTGTAACATACTTTTTGGAGGAAATGTACAATGGAAATTCCTTACGGAGCACAACAACTCTTGGGAATGAAAAAGAACGAGAAAGAGTTTATGATACTATCTTCCGCCTGCCCTGGAGATGTGAATTGCTTATAGATGTTGGCTTCTTTGTCTGCTTCGATTCATTTCTTTCATTATTAACTGTTATGCCAGCAAGGATCACGATGGCCATTTGGAGGATTCTAAAGACAAGGCAGTTCAAGAGGCTATCAACAATGGAAATTTCAGATTTTGGATGTTTTCTCATTATGACCTGCGGAGTGGTTCTTTTGCAACGAACAGAGTTGTATTGGGCTAGAGGAGATAATGAAAATGTGGTGAAAGAAATATTTGATAAACTATGTCAAAGTTTTAATGGGGATGTGTTGCAAACGTTATTTCTTTCTGCCGAAGGACTTGCGAATTGCCCTGAAGAAAGCATTCGATTCTGGATTTGGAGATTTGTTTCTGACCAAGCTTTAGCTGTGGTTGCTTCAAATATCCTTCATCTTTCTCAGGCAATCACTTTATCAACATGTATAGTTGCTCACAACAATGCTCTGTTGGCATTGCTGGTGTCAAATAATTTTGCTGAGATCAAAAGTAATGTGTTCAAGCGGTACAGCATGGATAATGTTCACAGTTTAGTGTACTTTGATTCCGTAGAGAGATTCCACATTTCATCCTTTATTTTATTCGTCTTGGCTCAAAATATTCTGGAGGCAGAGGGTCCCTGGTTTCAAAGTTTTCTTATTAATATCCTCTTGGTTTATGTATGTGAAATGGTTATTGATATTATCAAGCATTCATTCATTGCTAAATTCAATGACATTAAGCCCATCGCATACTCGGAGTTCCTCGAAGACCTATGTAAACAGACTCTAAATATGCAAACTGAGGGCGCAAAGAAAAACCTGACTTTTGTTCCCCTAGCCCCAGCATGCGTGGTTATACGAGTTCTGACTCCAGTATATTCTGCAAACCTTCCTAACAATCCCCTTCCATGGAGGCTTTTCTGGATTCTGCTTTTTTCAGCAATGACCTATGTTATGCTTACAAGCCTTAAGGTCCTCATTGGCATTGGCTTACAGCAGCATGCCACTTGGTATGTTAACCGCTGCAGAAGGAGGAAACATCATTTTCATGAAGATTAG 1743 0.4441 MALRNGSRKFSFEVLSVDTESESNEHSRRKRRHRASKRKKKLLDRADSVDPHIEPLENGGACNGFELDANRYSAGGGSVVYEEVREASVCAVVDAREAENEAPTAVRGGIEGFNFGKLRQRNVSCESSDDFPTSVVRDEKEEGGVKASPVEKPTNEPDRNVATKLETVESLDWKRLMEEDPNYVFSVEKSPVTYFLEEMYNGNSLRSTTTLGNEKERERVYDTIFRLPWRCELLIDVGFFVCFDSFLSLLTVMPARITMAIWRILKTRQFKRLSTMEISDFGCFLIMTCGVVLLQRTELYWARGDNENVVKEIFDKLCQSFNGDVLQTLFLSAEGLANCPEESIRFWIWRFVSDQALAVVASNILHLSQAITLSTCIVAHNNALLALLVSNNFAEIKSNVFKRYSMDNVHSLVYFDSVERFHISSFILFVLAQNILEAEGPWFQSFLINILLVYVCEMVIDIIKHSFIAKFNDIKPIAYSEFLEDLCKQTLNMQTEGAKKNLTFVPLAPACVVIRVLTPVYSANLPNNPLPWRLFWILLFSAMTYVMLTSLKVLIGIGLQQHATWYVNRCRRRKHHFHED 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01332 580 PANTHER UNCHARACTERIZED 75 576 IPR008010 -
Vimu10g01332 580 MobiDBLite consensus disorder prediction 128 158 - -
Vimu10g01332 580 MobiDBLite consensus disorder prediction 16 59 - -
Vimu10g01332 580 MobiDBLite consensus disorder prediction 132 147 - -
Vimu10g01332 580 Pfam Eukaryotic membrane protein family 312 566 IPR008010 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01332 Vimu-Chr10 13960198 13966240 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01332 - - gmx:100807550 942.954