Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01319 ATGACGAAGGAGTGTGATTCCTCAGAGGAAGAACAGCCTCAAGCTGCTGCTTTGAGGAGGAATCTAGAAAAGTTTAAGTTTGAAATCAACAGCGTCAATGAGGGAATTCAGTCGTCTATACTGGCTCGGAGAACTAATGGAACTTGGGGGCCTTCACGATATTTAATTCGGGGGGAGCAGAATGTTTCTGAGTCTGATGAAGATGAGGATGATGATGCAAAATCTCTTTTTCAATGTCCTTTCTGTGACTTTGAGTTTGATTTTTCTTCAGTTCGTGCTCGTTTGGAAGAGGGTGGTTTTGACCCAAGATATATGACCTGTCCTCTGTGTGAGGAAATTATAGGTGAGGATGCAGTCAGGGATGCACAGAATTCAAGCAAGAGATCTTGGAAGTCTGACAAATCTAGCATCTCGTCAAGTGATACGGTAGTGTTTGACAAGAAACTTCCTGCCAGAGGAAGACATGAACTGGTGCCTGATCCCCTTCTGACACCATTTGTTCGCAATGTGTCTGTTCCAAACACCAGTGGTATCCAACCTAGTGAAGGTTTCTCCAGCAGTGCCTCAGACATTTCCAGTGGAAAGGGGTATGATCCTGACATTTCCAGTGGAAAGGGCTCAGAGACAGACTCGGGAGATGAAGAGGATATTGAAGAGAGAAGGCAGAAGGCATCTTTTGTTCAAGAGTTGATGTTATCAACTTTATTCTAG 711 0.4416 MTKECDSSEEEQPQAAALRRNLEKFKFEINSVNEGIQSSILARRTNGTWGPSRYLIRGEQNVSESDEDEDDDAKSLFQCPFCDFEFDFSSVRARLEEGGFDPRYMTCPLCEEIIGEDAVRDAQNSSKRSWKSDKSSISSSDTVVFDKKLPARGRHELVPDPLLTPFVRNVSVPNTSGIQPSEGFSSSASDISSGKGYDPDISSGKGSETDSGDEEDIEERRQKASFVQELMLSTLF 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01319 236 Pfam Stress-induced protein Di19, C-terminal 157 235 IPR027935 -
Vimu10g01319 236 MobiDBLite consensus disorder prediction 172 224 - -
Vimu10g01319 236 PANTHER PROTEIN DEHYDRATION-INDUCED 19 63 236 IPR033347 -
Vimu10g01319 236 MobiDBLite consensus disorder prediction 172 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01319 Vimu-Chr10 13790537 13794689 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01319 - - vra:106761550 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00602 7 6085640 6089962 Vimu10g01319 10 13790537 13794689 PCT