Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01309 ATGGAATTTGCAGTTGCAGAGAATCTTGGATTAACAGGACACGTGGTGGCCATGCCTTACCCTAGCCAAGGACACGTAAACTCCATGATCAACCTCTGCAACCAGCTTGCTTCACTTCAAACTTCCATTCTCATCACCATTGTCGTCACACAAGAGTGGCTTGGCTTAATCGCCTCCCACCCAAAGCATACCAACATTCGCTTCGCTACCATCCCCAACGTTGTCCCTCTCCAATCTCAGATTGCCTCCGATATCACTGCTTTCTTCCAAGCTGCCGTCACCAACCTCCAACCTCCCTTCTGCCGCCTCCTCCACCGCCTCCACCCCGCCGTCACCGCCCTCGTCGCCGACGTCGAGCTGCAATTCCCAGTTGCCGTCGCACGCCTCATGGATATTCCGGTCGCGCTGCTTTGGACCATGTCGGCTTCCTTTTTCCTCAGCTTAGATCAACTACAAAAGTTGGTTCCTAACGGAGCTTTGAAGGCTGATCTTTTAGAGGTTGAAGTGATGCCTCATTTGCTGGTGAAATTCCCAAAGACCCGTCATAAATGCTTAACTCAGTTGCTGCTTATAGTAATGGTCGATACAAGGAAGATTTCTGGAACAGTGAATTTGGGGATTCCAGATGATTGTGAAGAGCATATATCAGGAATTTCTCCGGCACAATTGGCTGATCTTCAAACGGTGCTTCGTGAGAATGACTTGAGGTTTTTGCAAATAGAGTTGGAATGCATTTCAGAAGTGTCCAAAGCAGATTGTCTTATAGTTAATAGTGTTCAAGGGTTGGAAGCTGAGGCGATTGGTTCTTTGAGAGCCATGTTTCACTTTCCAATTTATCCTATTGCCTTCCCATACTTCAAACCTCAAGCAAATCAGTCAGTTTCCTATAGTGATTACAAGTTGGACTACTTAAATTGGTTAGACTCTCAGGCAGCTATGTCAGTATTATACATTTCTCTGGGTAGTTTCCTCTCTGTGTCTTGTGCCCAAATGAATGAGATTGTTTCTGCTTTAGAAACGAGTGGTGTTCGTTATTTGTGGGTGGTTCGTGGAGAAGTTTCCTGGCTAAAAGAGAAATGTGGGGATAGGGGAATAGTGGTGCCATGGTGTGACCAATTGAAGGTTTTGTCACATCCTTCTGTAGGTGGATTTTGGACCCATTGTGGGTGGAATTCCACTCTGGAAGCTGTTTTTGCTGGTATTCCAATGCTGACATTCCCTCTTTTCTTTGACCAAGTCCCAAACAGTAGACAAATTTTGGAAGTCTGGAAGAATGGATGGGAGTTAAAAAGATCAGAGCTGGGAAGTGAAGAATTGATAGCACAAAAAGAAATATTGGAAGTGATTGGAGAGTTTATGGATGTTGAAAAGGGTAAAGAACTTCGAGAGAGGGTCCTAGAACTTAAGGGTATATGTGACCAAGCAGTTGCTGAAGGTGGATCCTCCAATATGAACCTCAGTGCACTTATGAAAGATGTTTTGTGTGTTCAAGGTCATTCAGCTTCAAAGGAGTGCTAG 1518 0.4513 MEFAVAENLGLTGHVVAMPYPSQGHVNSMINLCNQLASLQTSILITIVVTQEWLGLIASHPKHTNIRFATIPNVVPLQSQIASDITAFFQAAVTNLQPPFCRLLHRLHPAVTALVADVELQFPVAVARLMDIPVALLWTMSASFFLSLDQLQKLVPNGALKADLLEVEVMPHLLVKFPKTRHKCLTQLLLIVMVDTRKISGTVNLGIPDDCEEHISGISPAQLADLQTVLRENDLRFLQIELECISEVSKADCLIVNSVQGLEAEAIGSLRAMFHFPIYPIAFPYFKPQANQSVSYSDYKLDYLNWLDSQAAMSVLYISLGSFLSVSCAQMNEIVSALETSGVRYLWVVRGEVSWLKEKCGDRGIVVPWCDQLKVLSHPSVGGFWTHCGWNSTLEAVFAGIPMLTFPLFFDQVPNSRQILEVWKNGWELKRSELGSEELIAQKEILEVIGEFMDVEKGKELRERVLELKGICDQAVAEGGSSNMNLSALMKDVLCVQGHSASKEC 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01309 505 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 296 440 IPR002213 GO:0008194
Vimu10g01309 505 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 13 493 - -
Vimu10g01309 505 FunFam Glycosyltransferase 294 474 - -
Vimu10g01309 505 PANTHER GLYCOSYLTRANSFERASE 14 488 - -
Vimu10g01309 505 Gene3D Glycogen Phosphorylase B; 14 173 - -
Vimu10g01309 505 CDD GT1_Gtf-like 14 469 IPR002213 GO:0008194
Vimu10g01309 505 Gene3D Glycogen Phosphorylase B; 291 474 - -
Vimu10g01309 505 Gene3D Glycogen Phosphorylase B; 209 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01309 Vimu-Chr10 13678654 13680498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01309 14 493 Glycosyltransferase AT2G30150 41.408 6.57e-115 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01309 - - vun:114196047 827.78