Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01292 ATGGCTCCCAGCTTAAGCAAAACAGTGCAACTAGGTTCGTTAGGTCTGGTCCCCGACAATTCGCCCTTGTCCATAACCTTAAACGGCTCCAACTTCCTCGCTAACGGCCACCCTTTTCTGACGGAAGTCCCCCCCAACATAACGGCCACCCCTTCGCCCTCCGTGTATTCTAAAGCCACCGACACGGTGGTGGGTTGCTTCGTGGGGTTCCTCGCGGAGGAGGCGAGGAGCCGCCACGTGGTGCCTCTGGGGAAGCTGAGGGGCATTAGGTTCATGAGTCTATTCCGGTTCAAGGTATGGTGGACCACGCACTGGGTTGGAAGCAACGGCCACGAGGTAGAACACGAAACCCAAATTATCCTTCTCGACAAGAATGACTCGCTGGGTCGCCCATACGTCTTGCTTCTTCCCATTCTCCAAGGCTCCTTCCGAGCCTCCCTCCAACCTGGCTTAGATGACTACGTGGACCTTTGCGTCGAGAGCGGCTCCACACGTGTCACTGCCTCCAGCTTCGGGAGCTGCTTGTACTTCCACGTCGGCGATGATCCCTTTCGCTTGGTAAGTGAAGCAGCCAAAGTGGTTAGAATGCATTTGGGGACTTTCAAGCTTCTGGAGGAGAAAACCGCGCCAGCGATAATTGATAAGTTTGGATGGTGTACGTGGGACGCGTTTTACCTGAAGGTGCACCCATTAGGGGTGTGGGAAGGGGTGAAGGGCCTTGTGGAGGGAGGCTGCCCTCCGGGGATGGTCCTAATAGATGATGGGTGGCAATCAATTTGTCACGATGAGGATCCCGTGACGGACCAAGTGGGTGTGAACCGAACCTCCGCTGGGGAGCAAATGCCGTGCAGGCTCGTGAAGTTCGAGGAAAATTACAAGTTCAGGGATTATCGTAGTGTTGAAGGGTCTGAGAAAGGTTTGGGCGCGTTCGTTAGGGATATGAAGAAGCGGTTTAGGAGCGTGGAGCAGGTGTATGTTTGGCACGCGCTCTGTGGATACTGGGGTGGGGTCAGACCTGAGCTTCCGGGCATGCCCGAAGCTAAGCTTGTTACACCGAAGCTGTCCCAGGGGTTAAAAATGACAATGGAAGATTTAGCGGTGGATAAGATCGTGAATAACGGTGTGGGACTCGTGCCACCTCACCTCGCTCACCGTTTGTACGAGGGGCTCCACTCGCGTTTGGAATCGGCGGGAATTGACGGCGTCAAAGTTGACGTTATACATCTGCTGGAAATGCTATCAGAGGAATTCGGTGGGCGTGTTGAGTTAGCCAGAGATTATTACAAAGCACTCACTGCATCGGTGAAGAAGCATTTCAAAGGCAATGGAGTCATTGCAAGCATGGAGCACTGTAATGATTTCTTTCTCCTTGGCACTGAAACCATAGCCCTTGGTCGCGTAGGAGATGATTTCTGGTGCACTGATCCCTCTGGGGATCCAAACGGAACGTATTGGCTCCAAGGGTGCCACATGGTGCATTGTGCCTACAACAGCTTGTGGATGGGAAATTTTATTCACCCAGATTGGGACATGTTTCAATCTACTCACCCATGTGCTGAATTCCATGCTGCTTCCAGAGCAATCTCTGGTGGACCCATTTACGTCAGTGATTGTGTTGGAAAGCACAACTTCAAGCTGCTCAAGAGCCTCTCTTTGCCTGATGGCACCATCTTGCGTTGCCAACATTATGCACTCCCCACACGAGATTCTTTGTTTGAAGACCCTTTACACGATGGGAAAACAATGCTCAAAATTTGGAATCTCAACAAATATACAGGTGTGTTGGGTGTGTTTAACTGCCAAGGAGGAGGGTGGTGTCCGGTGACGCGGCGAAACAAGAGTGCCTCTGAATTCTCACACACTGTGACATGTTTGGCGAGTCCTGAAGATATTGAATGGAACAATGGAAAAGTTGGAATGAGCATAAAAGGGGTGGATGTGTTTGCTGTGTATTTGTTGAAGGAGAAGAAACTGAAGCTGATGAAATGGTCAGAGAAATTGGAAGTTTCATTGGAGCCATTTAGTTTTGAGCTGTTGACAGTGTCTCCAGTGAGAGTTTTATCAAACGGGTTGATTAAATTTGCTCCAATTGGATTAGTGAACATGCTTAACTGTGGTGGTGCCATTCAATGTATGGAGTTTGATGATGAGAGAGATGTGGTGAAAATTGGAGTGAGAGGTTGTGGAGAGATGAGGGTGTTCTCATCGGAGAAGCCAATCAGTTGCAAAATAGATGGAGTAGCTATCAAATTTCAGTATGAGGATAGAATGGTGAGAGTCCAAGTTCCATGGCCTACTTCAAAATTCTCAATGCTTCAGTTTTTGTTTTGA 2331 0.4981 MAPSLSKTVQLGSLGLVPDNSPLSITLNGSNFLANGHPFLTEVPPNITATPSPSVYSKATDTVVGCFVGFLAEEARSRHVVPLGKLRGIRFMSLFRFKVWWTTHWVGSNGHEVEHETQIILLDKNDSLGRPYVLLLPILQGSFRASLQPGLDDYVDLCVESGSTRVTASSFGSCLYFHVGDDPFRLVSEAAKVVRMHLGTFKLLEEKTAPAIIDKFGWCTWDAFYLKVHPLGVWEGVKGLVEGGCPPGMVLIDDGWQSICHDEDPVTDQVGVNRTSAGEQMPCRLVKFEENYKFRDYRSVEGSEKGLGAFVRDMKKRFRSVEQVYVWHALCGYWGGVRPELPGMPEAKLVTPKLSQGLKMTMEDLAVDKIVNNGVGLVPPHLAHRLYEGLHSRLESAGIDGVKVDVIHLLEMLSEEFGGRVELARDYYKALTASVKKHFKGNGVIASMEHCNDFFLLGTETIALGRVGDDFWCTDPSGDPNGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFKLLKSLSLPDGTILRCQHYALPTRDSLFEDPLHDGKTMLKIWNLNKYTGVLGVFNCQGGGWCPVTRRNKSASEFSHTVTCLASPEDIEWNNGKVGMSIKGVDVFAVYLLKEKKLKLMKWSEKLEVSLEPFSFELLTVSPVRVLSNGLIKFAPIGLVNMLNCGGAIQCMEFDDERDVVKIGVRGCGEMRVFSSEKPISCKIDGVAIKFQYEDRMVRVQVPWPTSKFSMLQFLF 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01292 776 Gene3D Aldolase class I 214 552 IPR013785 -
Vimu10g01292 776 FunFam Probable galactinol--sucrose galactosyltransferase 5 214 553 - -
Vimu10g01292 776 SUPERFAMILY (Trans)glycosidases 210 561 IPR017853 -
Vimu10g01292 776 Pfam Raffinose synthase or seed imbibition protein Sip1 28 760 IPR008811 -
Vimu10g01292 776 PANTHER - 27 767 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01292 Vimu-Chr10 13273900 13277644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01292 27 776 Glycoside Hydrolase AT5G40390 65.138 0.0 1037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01292 K06617 - gmx:100800308 1385.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01292 10 13273900 13277644 Vimu10g01292 10 13273900 13277644 ECH