Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01290 ATGGACGCAGATTCTGAAAATTGTGAAAATAGTGATTCTACCTTTGTTTGGGATCACAAATCACAGCTTTACTTCCACGCTAGTAGTGGATTTTACCATGACCCTAATGCCGGGTGGTATTATAGCAGCAGAGATGGTGCTTATTACAAATTTGAGGATGGGAATTATGTACTTTTAGATTCCAATAAGGACGATAATGGAGACACATATCTGTGCAAGGAAACTACCACAGAAAGTCCTCAACAAATCTCTGAGGGGAACGACATCGAGGATTATTTTTCCTTTCTTGAAAATAGATCTGAAACAAACCAACAGACAAGAATCCTGGCTAATGAAGCACTTGATGATGGCACAAATTCTGTGAGTAGTCCAACTTGTGAAAAGCCACCACCACCACCATCGGAATGGTTAGAGGACACACTTATTGATCTGTACTTGTCTGGCTACAAGAATATAGCAGTAAGTGAAGCTGATGGCGCGACAGTGCCGCTGGAAACAGATGACGGATATAACACTTTAGCAGCTGATGCTTACAGCAAAACTTATGAAGTGGAAGGTGAGTGGAACCCAAACCAAGTAGCTGAAAATGGCTTAGCTGATACTAAAAGTATTATAGATGAAGGTAACAACTCTTATGAACTGGAAGAGGGTGAGTGGATCCCGGACATGGAGGATGAATGTGACATAGCTGATAGAAGTACCATAGATGAAGGTGTGTTATCGGATGAAGAGAAATGGCGAGCTCAATATGGTCAAGTTACTGAATCAGGGAAAGATCTGGTTTTAGAGGTTCCAATTGTGGACTTGTGGGATTGGGAAATGGTTACGAAATTCAAAAGAGATGAAAAAGATAAAGTTGCAAGGTTGGTTGGAAGATTGGTGAGACCATCTGCAAAACAACATCCATCTATCCCTTCTGGTGGAGGGAAATTAAGATCTGCTCCCATCTGTGAAGCACATCTTGATCTGGTACGAGTTAGAACAGGACAAGTGTACAGATTGCGAAATCCTAGTGCAAAATACATGGCTTCATTATCAACTTATGATTCCTCAAATCCAACAAAATATTGGGATTTTCCCCAGCTATCACCTAATAGAAAAATCACTCAGCTCTCCAAGTCCAGTGAAAGTTCTGCTTCAGTTTCAGATGATATCCCTGTAGAGAAGGATTTGTCTGCATTACCAAGTCAGCTCTCTGTATCTAAGGAAATTAAACATCAATACAGAGATAGGGCTGCTGAAAGAAGAATATTGCATGGTGGCTTCGGCATGGGTCCAGGACAGAAGAATCTGCCTGATGTTTATAATTCGCCATCTTCACCTGATGCTGGTTGTCCTCAAGAAGCTGCATCAGAGGCCTTGGAGATGTCATTTGGAGCAGATAGTTATGCCAGAAAGCTTTTGAAAAGCATGGGTTGGAAGGAGCTCAAAAGGCGCCACACCATGAGGAAGACAGGTGGGGGAAGGGCTTGGAAGCTCTACGAAGGGCTTGGTGGAACCTATTCAACCAGTTGGAAATGTTGGCACTGCAGGTTTGGGATGGTCTCTTTGAAACGGATCACATGCTTAGTATCTGTTATAGGGTCTAAAGAGAGCTATTTTGAAAGCTAG 1611 0.4227 MDADSENCENSDSTFVWDHKSQLYFHASSGFYHDPNAGWYYSSRDGAYYKFEDGNYVLLDSNKDDNGDTYLCKETTTESPQQISEGNDIEDYFSFLENRSETNQQTRILANEALDDGTNSVSSPTCEKPPPPPSEWLEDTLIDLYLSGYKNIAVSEADGATVPLETDDGYNTLAADAYSKTYEVEGEWNPNQVAENGLADTKSIIDEGNNSYELEEGEWIPDMEDECDIADRSTIDEGVLSDEEKWRAQYGQVTESGKDLVLEVPIVDLWDWEMVTKFKRDEKDKVARLVGRLVRPSAKQHPSIPSGGGKLRSAPICEAHLDLVRVRTGQVYRLRNPSAKYMASLSTYDSSNPTKYWDFPQLSPNRKITQLSKSSESSASVSDDIPVEKDLSALPSQLSVSKEIKHQYRDRAAERRILHGGFGMGPGQKNLPDVYNSPSSPDAGCPQEAASEALEMSFGADSYARKLLKSMGWKELKRRHTMRKTGGGRAWKLYEGLGGTYSTSWKCWHCRFGMVSLKRITCLVSVIGSKESYFES 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01290 536 Pfam OCRE domain 12 53 IPR041591 -
Vimu10g01290 536 PANTHER RNA-BINDING PROTEIN 9 475 - -
Vimu10g01290 536 CDD OCRE 13 54 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01290 - - gmx:100806477 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01290 10 13213329 13218037 Vimu10g01290 10 13213329 13218037 ECH