Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01271 ATGATACTTGGTCCTTCGTTTTCTTTGATAAGATTACAAATTCATTGGATGCAAATAGTTTTTCAAGTCAAAGAGAATCTATGGGTTTTTGTGGGAACAGCTTTGACAGTCACAACAATCGGATTTCTTAAGGAAGCTCCTCAAGTCAATATCCATGGTTTTAATGTATATCACAAAAATCGGCTTATACTGCCATTTTGGCAGGTTGTAAGCTATTTAGACAGTAGAGGTAGAGGAGTTGTTGGTATCCTGCAGGCAGATTTTATTGAGCCAACACATAACAAACAAGATTTTGAGAGAACTTCCCTGTTTCAAAAGCTTGAAGTGCGACTGAAGCAGATGACATGGGAATACTGGGATACACATTGTACATTGTTTGGATACAAAGAAAAGAGGAAGATTAAACCTGGGATTACATCAATGCAAAAACCAGTGGTTGTAGAAAAACCAGTTGTATTGAACAAACGTTCCTCCTCTCTTTTCAATGCAGAAGCATACCGGAATTCCTTTCGGTGTTCCAAAAATCTGCAAAGATTGGAACAAGGTTCTCAGAATAAGAGGAAGAACTCACATGAACTGGTAAACCTTCTGGATACACAAAAGCTTGCGAGGACAGATATTGTAACCGGTGTTGAGTTTAATCAGAATAAACAGGTCGGCATTTGCTTCATCATTATGTTGAAATTTGTTAGTGAATATCATTTAGTAGCATATTTTCAATGGTATCATTTCTAA 735 0.3687 MILGPSFSLIRLQIHWMQIVFQVKENLWVFVGTALTVTTIGFLKEAPQVNIHGFNVYHKNRLILPFWQVVSYLDSRGRGVVGILQADFIEPTHNKQDFERTSLFQKLEVRLKQMTWEYWDTHCTLFGYKEKRKIKPGITSMQKPVVVEKPVVLNKRSSSLFNAEAYRNSFRCSKNLQRLEQGSQNKRKNSHELVNLLDTQKLARTDIVTGVEFNQNKQVGICFIIMLKFVSEYHLVAYFQWYHF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01271 244 Pfam Morc6 ribosomal protein S5 domain 2-like 36 119 IPR041006 -
Vimu10g01271 244 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 34 188 IPR045261 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01271 Vimu-Chr10 12897567 12903593 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01271 - - gmx:100795667 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01271 10 12897567 12903593 Vimu10g01271 10 12897567 12903593 ECH