Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01265 ATGGGGTCTTTGTGGAGTTCACCGATAAGGAAAGAACAGATGGAAGCAGCATTGAATAAGGCTAAGGGGATAGTATCCTCTTCCCCTGTTGTTGTCTTCAGCAAGACTTACTGTGGTTACTGCAAGCGGGTCAAAGATCTCTTCCAACAGCTTGGAGCATCCTGCAAGGTTGTTGAATTGGACACAGAAAGAGATGGAGATGATATTCATTCAGCTTTAATCGAGTGGACGGGACTTAGGACTGTGCCTAACGTGTTTATTGGAGGAAAGCACATTGGTGGTTGTGATACTGTTTTGGAGAAACACAAAACAGAACAACTGGTTCCTCTTCTGAATGATGCTGGGGCGATTGCCAATAACTCTGCTCAACTGTGA 375 0.448 MGSLWSSPIRKEQMEAALNKAKGIVSSSPVVVFSKTYCGYCKRVKDLFQQLGASCKVVELDTERDGDDIHSALIEWTGLRTVPNVFIGGKHIGGCDTVLEKHKTEQLVPLLNDAGAIANNSAQL 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01265 124 FunFam Glutaredoxin 2 15 124 - -
Vimu10g01265 124 Gene3D Glutaredoxin 9 124 - -
Vimu10g01265 124 CDD GRX_GRXh_1_2_like 35 110 - -
Vimu10g01265 124 PANTHER GLUTAREDOXIN 2 12 117 - -
Vimu10g01265 124 PRINTS Glutaredoxin signature 75 88 IPR014025 -
Vimu10g01265 124 PRINTS Glutaredoxin signature 89 102 IPR014025 -
Vimu10g01265 124 PRINTS Glutaredoxin signature 30 48 IPR014025 -
Vimu10g01265 124 Pfam Glutaredoxin 30 92 IPR002109 -
Vimu10g01265 124 ProSiteProfiles Glutaredoxin domain profile. 18 118 - -
Vimu10g01265 124 ProSitePatterns Thioredoxin family active site. 30 48 IPR017937 -
Vimu10g01265 124 NCBIfam glutaredoxin 30 110 IPR011899 -
Vimu10g01265 124 SUPERFAMILY Thioredoxin-like 19 117 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01265 Vimu-Chr10 12788733 12790094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01265 24 117 Miscellaneous Gene Families AT4G15700 40.426 3.37e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01265 K03676 - qsu:111991481 199.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01265 10 12788733 12790094 Vimu10g01265 10 12788733 12790094 ECH