Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01227 CCACCACCACAACTGATAGCGTCCTATATATCCCACACCCGAACCACCCACCACACTTTCCTTCATTTCATCAAAACCAAACCCTTTTCTCTTTCTCTCCATATATCGCTTTGTCTTTTTCTTTTTTTCCCAATTGGTGCCAACGGAATCGCATTTCCAAATTTCAAAACGAGAGAAACGATGCAGCGCCCGCAGGTGGAGCTGGAAGAACCTTCCTTTCATCACGAAAAGGCATCCCCTTCTCCCAGTTTCAGCAGTTACTCCTCGGAGACACTCGCGGAGATCGCAGCCAGGGTAATTGAGGAGCTCCGCCGCGACCCTCATTCCCACGACGACGCGCTCTTTCCGGCGTGGGAAAACGACGACGACAACCACTTCACCGCGCAAAACAACGACTTCTCCGTACAAAACGACGAGTCCACGGCGCAAAACGACGACGATGACAACAGTTTCGAGTTCGCCTTTGTTTCCCACGACTTGGCTTCTCCGGTTTCAGCGGACGACATTTTCTACAACGGCCAGATCAAGCCCATGTACCCAATCTTCGGCGTTCCTTCTCACGACGACGTTTTGAGTGTTCCGAACACTATTGATGGTACCGCTACAACTCCAGAGGGGACAGTGAGACGGCGTCGTCTCCCTCTGAGGAAGTTAATGTTCGAGGAGGGTGAAACGGCGTCGTGCTCGTCGTCAACGGACGAGAGCGTTGACTTGGAGGGGGTGGCGGAAGGCGCGTACTGTGTGTGGACTCCGAACTCCGTCGGAAGGGAACGGAAAAAGAGCAACTCGACGGGGTCCGCATCGAAAAGGTGGAAGCTTCGGGATTTGCTTCTGAGGAGCCACAGTGAGGGGAAAGATAAACAACAACAAAAACAGCAGCAAATGGTATTTCAGATTCCGACGAACAAAGTGAAACCTCAGAACGGAACAGTCGGAACGGAGCATCATGCGGAAGAGAACAAGAGGAAGTCTTTCTTGCCTTACAGACCAGAATTGGTTGGACTTTTCACCAATGTCAATGGGCTTGGTCGGAATTTGCGCCCCTTTTGA 1050 0.5171 PPPQLIASYISHTRTTHHTFLHFIKTKPFSLSLHISLCLFLFFPIGANGIAFPNFKTRETMQRPQVELEEPSFHHEKASPSPSFSSYSSETLAEIAARVIEELRRDPHSHDDALFPAWENDDDNHFTAQNNDFSVQNDESTAQNDDDDNSFEFAFVSHDLASPVSADDIFYNGQIKPMYPIFGVPSHDDVLSVPNTIDGTATTPEGTVRRRRLPLRKLMFEEGETASCSSSTDESVDLEGVAEGAYCVWTPNSVGRERKKSNSTGSASKRWKLRDLLLRSHSEGKDKQQQKQQQMVFQIPTNKVKPQNGTVGTEHHAEENKRKSFLPYRPELVGLFTNVNGLGRNLRPF 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01227 349 PANTHER OS07G0619500 PROTEIN 79 346 - -
Vimu10g01227 349 MobiDBLite consensus disorder prediction 62 86 - -
Vimu10g01227 349 Pfam Protein of unknown function (DUF1645) 166 318 IPR012442 -
Vimu10g01227 349 MobiDBLite consensus disorder prediction 289 309 - -
Vimu10g01227 349 MobiDBLite consensus disorder prediction 62 76 - -
Vimu10g01227 349 MobiDBLite consensus disorder prediction 282 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01227 Vimu-Chr10 12203069 12204804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01227 - - gmx:100789513 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01227 10 12203069 12204804 Vimu10g01227 10 12203069 12204804 ECH
Vimu7g00670 7 6695870 6696535 Vimu10g01227 10 12203069 12204804 PCT