Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01216 ATGGTGGTGGCGGGTCTGTCTCCGGCCATCTCCATCTCCACCGCCACCACAACCCCCTCTTGCTTCCATTCTCGCGCCACAAAACCACCTTCTTTTTTCGGCCTACTCCACTCTCCCCAGCCCAATCTCTCCATCTCCGCGAGGAGGAACCGCTACAACACCACCCACTGTTGCCGCTGCTCCCTCAATTCCGGCGATACCTACGTCAATTGGGATTGGAACCGATGGTGCCGCTATTTCTCGGAAATCGAACAGGCCGAGAACTTTGCCTCTGTCCTTAAGTTTCAACTTGATGATGCTATAGAGAAGGAAGACTTTGAAGAGGCCATTAAGTTGAAGAGGGCTCTTTTGGAAGCAACGTCCAAGGACACTGTTGCTGAAATTATGGATCAGTTGAAGAGTGCTATAGATGATGAACGATATCATGATGCTTCAAGATTGTGTAAATGCACTGGAAGTGGACTGGTGGGCTGGTGGGTAGGTTACTCAAAAACCACCGGTGACCCCTTTGGTAGAATTATACATATAAGTCCTGGCATGGGTAGGTTCATTGGCAAGAGTTACAGTCCAAGACAGTTGATGACAGCATCTAGTGGAACTCCAATTTTTGAAATTTATGTGGTAAAAAATGCTGATGATACGTATCATATGCAGGTAGTGTATTTGCGACAAGCCAAAGGAAAGTCAAAGAGAAACCCTCTATCTATATCTGCTAAAGGCCCATCCAAACCTGAGCTGGATAATGTATCTTCATCAGTTGAGGTGCAGGAAGATGAAGAGAAGGTTGAAAGAAATGATGAGAAAAACAATAACATCGAGGCAGTAACTGAAGAGGGAATTAAAAGTGTCATAAATTTTCTTAAAGAAAAAATTCCAGGATTAAAAGTCAAAGTTATGAATGTTAATGTTGAAGAGGAAGCAGCAGAGAACAATGATTCTATTCAGCAATTGATGGAGGATGATAGTAATAAAACTGGCACTGGTGAGAATCATGAAGATGAAGTTGATAATCTCGATGAACCTGATGGGGTCACTCTAGACAGAGATGGAGATACCGCAGAAGAAGAAAAGGATTTGGAAATGAAGCTTTTTATTGGTGGGGTTGTACACAACAATGAGGATACTCCTCTCAAGGATGATTTTGTACGTCTTCCAGCAGTAATAAAAAATATGGAAAAAGATTCTTTTGTCTTCAATTTTGCTAGCAAAAATCCAGACTATGGTATCAAAGAAGATAAAACTCCCAATATCAAAGTGGCCGCGTTGGCAGCTCAAGGAGTCTCGGAGCTTATGCCTCCTGATGTTGCTAATGCATTTTGGAGTTCCGACAAAGTGTCTTCCAAGATCTCCAAAAGCATGCGTGATATTGTCAGAGTTGCTATGAGTCAAGCACATAAAAGAACAAGATTATCTGGGGATACATATTTTAACCGGATTACCTGTTCAAGAGGGGATTCTGATCCTTTTGATGGACTTTATGTTGGCGCATTTGGCCCTTATGGCATGGAAGTAGTTCATTTGAGGCGAAAATTTGGACATTGGAATGAAGGGGACAGTGAAAATAACACTTCAGATGTCGGATTCTTTGAGTATGTAGAGGCTGTGAAGTTAACTGGGGATCTTAATGTTCCTGCTGGCCAGGCGACATTCCGTGCAAAAATTGGCAGAGGCAATCGCAACACCAATCGTGGGATGTATCCTGATGATTTAGGAGTGGTTGCTAGTTATAAAGGGCAGGGGAGAATAGCTGACTATGGTTTTCGAAATCCAAAATGGGTGGAAGGGGAACTGCTCCAACTTAATGGCAAGGGCATGGGACCATACATGAAAGGTGCAGACCTCGGCTTCCTTTATGTAGTACCTGAACAAAGTTTTCTAGTGTTATTCCACCGGTTGAAACTACCCGAGTAA 1911 0.4317 MVVAGLSPAISISTATTTPSCFHSRATKPPSFFGLLHSPQPNLSISARRNRYNTTHCCRCSLNSGDTYVNWDWNRWCRYFSEIEQAENFASVLKFQLDDAIEKEDFEEAIKLKRALLEATSKDTVAEIMDQLKSAIDDERYHDASRLCKCTGSGLVGWWVGYSKTTGDPFGRIIHISPGMGRFIGKSYSPRQLMTASSGTPIFEIYVVKNADDTYHMQVVYLRQAKGKSKRNPLSISAKGPSKPELDNVSSSVEVQEDEEKVERNDEKNNNIEAVTEEGIKSVINFLKEKIPGLKVKVMNVNVEEEAAENNDSIQQLMEDDSNKTGTGENHEDEVDNLDEPDGVTLDRDGDTAEEEKDLEMKLFIGGVVHNNEDTPLKDDFVRLPAVIKNMEKDSFVFNFASKNPDYGIKEDKTPNIKVAALAAQGVSELMPPDVANAFWSSDKVSSKISKSMRDIVRVAMSQAHKRTRLSGDTYFNRITCSRGDSDPFDGLYVGAFGPYGMEVVHLRRKFGHWNEGDSENNTSDVGFFEYVEAVKLTGDLNVPAGQATFRAKIGRGNRNTNRGMYPDDLGVVASYKGQGRIADYGFRNPKWVEGELLQLNGKGMGPYMKGADLGFLYVVPEQSFLVLFHRLKLPE 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01216 636 MobiDBLite consensus disorder prediction 307 353 - -
Vimu10g01216 636 Coils Coil 300 320 - -
Vimu10g01216 636 Pfam Cyclin D1 binding domain 477 634 - -
Vimu10g01216 636 MobiDBLite consensus disorder prediction 307 323 - -
Vimu10g01216 636 MobiDBLite consensus disorder prediction 254 268 - -
Vimu10g01216 636 Coils Coil 255 275 - -
Vimu10g01216 636 PANTHER PROTEIN EXECUTER 1, CHLOROPLASTIC 26 636 IPR044680 GO:0010343
Vimu10g01216 636 MobiDBLite consensus disorder prediction 231 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01216 Vimu-Chr10 12049678 12063016 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01216 - - gmx:100786321 1097.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01216 10 12049678 12063016 Vimu10g01216 10 12049678 12063016 ECH