Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01197 CTAGACCCAGACAGGATAGACTTGTCAGGGAACAACTTCGTAGGCGATGCTTCATTTCTTATCGGGAGCAAGAAAAAGATTCGCGTATTTGACCTTTCCAGGAACGCCTTCTCCTTTGATCTGTCTCGTTTGACGTTTCCCAAGGAAACCTTAACTTGGTTTGATATAAGTCACAATAACATCTATGGCAGCATTCCAATGGCGTTGACCAAAGTGCGATATTTCCAGCAGTTGAACTTCAGTTTTAATCCTGGCTTGAAGGGTCAAATACCGCAGGGTGGGGGATTGCAAACATTCGATAAATATTCCTATTTTCACACTAACTTGTGTGGCTCTCCACTTCCGCCCTGCACTAAATAG 360 0.4389 LDPDRIDLSGNNFVGDASFLIGSKKKIRVFDLSRNAFSFDLSRLTFPKETLTWFDISHNNIYGSIPMALTKVRYFQQLNFSFNPGLKGQIPQGGGLQTFDKYSYFHTNLCGSPLPPCTK 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01197 119 SUPERFAMILY L domain-like 5 111 - -
Vimu10g01197 119 Gene3D Ribonuclease Inhibitor 3 119 IPR032675 -
Vimu10g01197 119 PANTHER POLYGALACTURONASE INHIBITOR 1 4 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01197 Vimu-Chr10 11805984 11806409 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01197 6 114 Receptor kinase-like Gene Family AT4G13920 37.273 1.25e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01197 - - var:108330570 198.364