Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01179 ATGGTGATTTCATCACAAGATGGTTTTGTTTCCATAGATGGTGTAAAGAAAAATCAGTTGAAAGATGATTCCAAAGAAATTCAATCACAAGATAATACACCTTATGACCCTCAATCAAAGGAAAATGCTGTTCTTCGAGGGATAGGCCCAGTTGCTAATCACCATCATCATGATCACTCAAAACCAACTCTATTTTTCTCAGAAGAAGGATTGAGGCGGGGAGCAAAATTGGATCTGTATTTCCCTAAAATAAAATATTTAACCCTGTTGTTGCCCCGGGAAATTACAGAACACATACCATTCTCATCAGACAAGATAAATGAAATATTAGAGACTTTGGCTGTGAAGCCAGATTCTAAGAATGCTGAGAATGTGGAGGAAACTCTGAAGAACTGTGAAGATCCTGGAATGAGTGGTGAAGAAAAACACTGTGCAACTTCAGTAGAATCCATGGTAGACTTTGTCACTTCTAAACTTGGCAATAACGTCCATGTTACTTCTACAGATGTAGAAATTGAAAGCAAGTCCCAAAAGTTCATAGTTAAAGATGGAGTGAAGATTTTAGCAGAAGAAAAGATAATTGCATGTCACCCAATGGATTACCCATATGTTGTGTTTTACTGCCATAAGATATCAAATAGCACTGCACATTTTATGCCGTTGGAGGGAGAAGATGGAAGTAGGGTTAAAGCTGTAGCAGTGTGCCACAAAGACACATCAGAATGGGATCCAAACTATATTGCATTCTAA 750 0.3787 MVISSQDGFVSIDGVKKNQLKDDSKEIQSQDNTPYDPQSKENAVLRGIGPVANHHHHDHSKPTLFFSEEGLRRGAKLDLYFPKIKYLTLLLPREITEHIPFSSDKINEILETLAVKPDSKNAENVEETLKNCEDPGMSGEEKHCATSVESMVDFVTSKLGNNVHVTSTDVEIESKSQKFIVKDGVKILAEEKIIACHPMDYPYVVFYCHKISNSTAHFMPLEGEDGSRVKAVAVCHKDTSEWDPNYIAF 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01179 249 ProSiteProfiles BURP domain profile. 65 249 IPR004873 -
Vimu10g01179 249 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 30 249 IPR044816 -
Vimu10g01179 249 Pfam BURP domain 64 249 IPR004873 -
Vimu10g01179 249 MobiDBLite consensus disorder prediction 15 41 - -
Vimu10g01179 249 SMART BURP_2 63 249 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01179 Vimu-Chr10 11562190 11562950 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01179 - - var:108332058 439.113