Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01155 ATGAGTGCCGGCCAAAAAAACAAAACTAAAAACTTGTCTGTTACGGAAGAAGCTCCTTCCATCATACAGAATCTCTTCTTTTCTATTTCTTCTTTCTCTGTTACCACTTCCCACTCCCACAAATCCATCATGAACCTTCCATTTCCCGCCATTTTTATCATCTTCATTATCTCCATCCCTTCATCCATAGCCGGCGCTGGCGTTGACGCCATTTCGCGCCTTATTGAGACCCAAGACCGCGAAAGGACTCCTCCTTCCGTTCAGGAAGCCGCCGCGCGCGGCGTCCTCCTCCGCTTGTTGCCCTCTCTTTCCTCTAGCTTCCACTTCCGGATCATCTCCAAGAAGCAATGCGACGGTGAATATTGCTTCGTTATCAAAAACCTTCCTTCTTTTGCGACACAAAAGGATCCTCAAATTCTGATTGAAGGCACAACTGGAGTGGACATAGTGTCGGGTCTGCACTGGTATCTGAAGCATTGGTGCGGTTCACACATATCATGGGACAAAACCGGTGGTTCGCAGCTATTTTCCGTGCCCAATGCGGGCTTTCTCCCACGAGTTCACTCTGGAGGGGTCTCTGTTCAGAGGCCTATTCCGTGGAGCTATTACCAAAATGCAGTTACTTCTAGCTATTCCTTCGCTTGGTGGGACTGGGAAAGATGGGAAAAGGAAATTGACTGGATGGCTCTGCAGGGTGTCAACTTGCCGCTTGCGTTTACGGGACAAGAGGCTATCTGGCAGAAAGTGTTCCAGGAGAAATTTAACATGAGTACTTCTGATTTGGATGATTTCTTTGGAGGTCCGGCATTTCTGGCATGGTCACGCATGGGGAATTTACATGGATGGGGTGGACCACTGCCACAGAGCTGGTTTGATAATCAATTAATCTTACAGAAGAAAATTCTGGCCAGAATGTATGAGCTTGGAATGACACCAGTGCTGCCAGCTTTTTCTGGAAATGTCCCTGCTGCGCTAAAATATATATTTCCATCAGCAAAAATAACACGCTTAGGAAACTGGTTTTCTGTAAAGAATGACCTCAAATGGTGCTGCACCTATCTTCTTGACGCAACTGATTCTTTGTTCATTGAGATTGGGAAAGCATTCATTGAGAAACAACTACAAGAGTATGGAAGAACCAGCCACATATATAACTGTGATACTTTTGACGAGAACACCCCACCAATTGATGATCCAGAGTACATTTCATCATTAGGTGCAGCAATTTTTAAAGGAATGCAGAGTGGTGATGATGATGCTGTTTGGCTGATGCAGGGGTGGCTGTTTTCATATGATCCATTTTGGAGACCTCCTCAAATGAAGGCCCTTTTACATTCTGTTCCTGTTGGAAAGCTGGTGGTTCTAGACCTATTTGCTGAAGTAAAACCCATTTGGGTTACCTCAGAACAGTTTTATGGAGTTCCCTACATCTGGAAAGTTGGAGTTGGAATGTCTATGGAAGGTATTGAACAGAATCCCATTGTCTATGATTTGATGTCTGAAATGGCATTTCAGCACAAGAAAATTGATGTTAAGGTAAAATTAGAGAATCTTTTGAGTGAAGAGGACAAAAACAGAGATGTCATCGTAGCATTCCCTGAGGTTGACCCTTCCTTAATTTCGGAACAGCATGATCAGTCTCACCACTATGACATACCCTCAGGAATATTTATCAAGGAAACGATCGATACATTTGATCGACCACATTTATGGTATTCAACTTCTGAAGTAATCTATGCGTTGGAGTTATTTATAACTAGTGGAGATGAACTTTCTAGAAGTAAAACTTACAGGTATGACCTAGTTGATCTGACTAGACAAGTCTTGGCAAAATATGCAAATGAATTATTCTTTAAGGTCATAGAGGCATATAAATCACATGATGTCCATGGAACGACCTTTCTCAGCCAGAGATTTCTGGACCTTGTGGAGGATTTGGATACACTGTTGGCTTGCCACGATGGGTTTCTTCTGGGACCTTGGTTAGAAAGTGCAAAGAAACTAGCTCAAAATGAAGAACAGGAGAGACAGTTTGAGTGGAACGCTAGAACACAAATCACCATGTGGTTTGACAACACAAAAGAAGAAGCCAGTCTGCTTCGTGACTACGGAAACAAGTACTGGAGCGGGCTTCTGCATGATTACTATGGCCCCAGAGCTGCTATTTACTTTAAATATTTAAGAGAAAGCTTAGAGAAAGGTAAAGATTTCAAGCTAATTGAATGGAGGAGGGAGTGGATAAAGCTTACTAATGAATGGCAAAAGAGTAGGAATATTTTTCCAGTGGAAAGTAAGGGAGATGCTCTAATCACTTCTCGGTGGCTTTTTAACAAATACCTGAACTTCACCAATCCTGAAACAAAGCTTATACAAGAAAGGTTCCAGCGGGCAACCAATGGGAAAACGAGTTTTCTTGCAGATGCGAATTTCTCCATTCTCAATCACAACAATATAATGGCTTCCTATGGATCATCTTGGGCTGACCAGTGGGATAACGGGCCTGATCCAGTCAGCGCCTCCAACGAATCTAAGAAGAAAAGCAACAACAACGCTCTCGGGAAGACGAAGGCAGTGGCATCCAATGGCGTCAAGAAGTTGAAGGAGGGTACCTCCGTTGGCCTCCATTGGATTAAGACCAAGTACCACAAAACCACCCAGAAACATTAA 2667 0.4346 MSAGQKNKTKNLSVTEEAPSIIQNLFFSISSFSVTTSHSHKSIMNLPFPAIFIIFIISIPSSIAGAGVDAISRLIETQDRERTPPSVQEAAARGVLLRLLPSLSSSFHFRIISKKQCDGEYCFVIKNLPSFATQKDPQILIEGTTGVDIVSGLHWYLKHWCGSHISWDKTGGSQLFSVPNAGFLPRVHSGGVSVQRPIPWSYYQNAVTSSYSFAWWDWERWEKEIDWMALQGVNLPLAFTGQEAIWQKVFQEKFNMSTSDLDDFFGGPAFLAWSRMGNLHGWGGPLPQSWFDNQLILQKKILARMYELGMTPVLPAFSGNVPAALKYIFPSAKITRLGNWFSVKNDLKWCCTYLLDATDSLFIEIGKAFIEKQLQEYGRTSHIYNCDTFDENTPPIDDPEYISSLGAAIFKGMQSGDDDAVWLMQGWLFSYDPFWRPPQMKALLHSVPVGKLVVLDLFAEVKPIWVTSEQFYGVPYIWKVGVGMSMEGIEQNPIVYDLMSEMAFQHKKIDVKVKLENLLSEEDKNRDVIVAFPEVDPSLISEQHDQSHHYDIPSGIFIKETIDTFDRPHLWYSTSEVIYALELFITSGDELSRSKTYRYDLVDLTRQVLAKYANELFFKVIEAYKSHDVHGTTFLSQRFLDLVEDLDTLLACHDGFLLGPWLESAKKLAQNEEQERQFEWNARTQITMWFDNTKEEASLLRDYGNKYWSGLLHDYYGPRAAIYFKYLRESLEKGKDFKLIEWRREWIKLTNEWQKSRNIFPVESKGDALITSRWLFNKYLNFTNPETKLIQERFQRATNGKTSFLADANFSILNHNNIMASYGSSWADQWDNGPDPVSASNESKKKSNNNALGKTKAVASNGVKKLKEGTSVGLHWIKTKYHKTTQKH 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01155 888 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 51 479 IPR007781 -
Vimu10g01155 888 Pfam Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 202 479 IPR024733 -
Vimu10g01155 888 MobiDBLite consensus disorder prediction 834 856 - -
Vimu10g01155 888 Pfam Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 522 778 IPR024732 -
Vimu10g01155 888 Gene3D - 512 792 - -
Vimu10g01155 888 Gene3D - 66 190 IPR029018 -
Vimu10g01155 888 Gene3D Glycosidases 197 479 - -
Vimu10g01155 888 Gene3D Glycosidases 480 506 - -
Vimu10g01155 888 Pfam Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 90 181 IPR024240 -
Vimu10g01155 888 MobiDBLite consensus disorder prediction 833 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01155 Vimu-Chr10 11146102 11166955 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01155 K01205 - gmx:100791160 1339.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01155 10 11146102 11166955 Vimu10g01155 10 11146102 11166955 ECH