Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01145 ATGCAATCTCTTTCGTTCAGACTCACCAAGAGGCTCTACAATTCCAAGCCTCTCTTCAGAATCTCTTCCAACTTCGTTGCTCACGCATCCTCCGCCACCTCCACTCCCCCCTCTCCGCCGCCACCGTCTCCACCGATCCCCGCCCCTTCCACTCTACGTAACCTCCTCACCGCTCCGTGGTTCGCAACTCAGTCCCGCGGAATCTCTTTATCCGGATCTGATGTTAGAGTCGGGAATCTCGACGGAAACCGAGGATGCGCTCACGAGGTTCAGCCTCGCTCTGTAGCTGGTTATGCCACAGTTGCTTCTACGGCGGATGATATCAAAAGGTTAGTTGGTGCATTTGATGATGGTTTAGTTGATTCCCGTTTTTATCTATTGGTTGGCATGTATAGCAAGGAACGAAAGAGTGGATTAGGGAAAGAAGCGAAGACAAAGAGGGAGCAGCTCCTTAAAGCTACTGCAGTTGCCTCTCTTGTTTTATTATACCCAAACACCTATTCATTGCTCTTGGCAAATTTCTTTGTGTTCTGGCACTTAAAAGCTGGGATAGAAGAGATTTTGGCAGATTATGTTCACCATGCAATGACCAGAGAATTTATCACGATTTCTCTCAGGCTGTTCTTGATAATCGCAATGAAGGATGTTTTATTAAAATTTATATTTGTATAA 672 0.4628 MQSLSFRLTKRLYNSKPLFRISSNFVAHASSATSTPPSPPPPSPPIPAPSTLRNLLTAPWFATQSRGISLSGSDVRVGNLDGNRGCAHEVQPRSVAGYATVASTADDIKRLVGAFDDGLVDSRFYLLVGMYSKERKSGLGKEAKTKREQLLKATAVASLVLLYPNTYSLLLANFFVFWHLKAGIEEILADYVHHAMTREFITISLRLFLIIAMKDVLLKFIFV 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01145 223 MobiDBLite consensus disorder prediction 29 49 - -
Vimu10g01145 223 PANTHER SUCCINATE DEHYDROGENASE SUBUNIT 4, MITOCHONDRIAL 14 222 IPR044963 GO:0005743|GO:0005749|GO:0006099|GO:0006121
Vimu10g01145 223 MobiDBLite consensus disorder prediction 34 49 - -
Vimu10g01145 223 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 147 222 IPR034804 GO:0016020
Vimu10g01145 223 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 163 213 IPR034804 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01145 Vimu-Chr10 11060806 11069263 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01145 K25801 - gmx:100500565 261.922