Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01142 ATGGAAATGAGGGGAGAGCTTATTGAGAAGGCTTATGGTGGGTCTTTGAGGGCTCACAAGTCACCAGACAGACCTTACCTTATAGAAAAGATCAGCAGAAACGACCCTTCTGAAGTTATCATCTCTTTTCCTGGATCAGGTGCTGTCAGAGATTGGTACTCTCAGAGAAACTTTGGTGAAACCAATATAGATCTTACTCTCTTTCCCTCACTCAGAAGCATTGGTAGCGATGAACCTGCTTTAGTCAATGAGACCTTCTTAAAAAGATTCCAAGGCATTATTTTGTTGGCCAGACCATCACTTGCAGATGAGGTGGAGAAAGCTATGCGTAAAAAGAAGCAAATAGTGTTTGCAGGGCACTCTTCTGGTGGTCCAATGGCTATTCTGGCAACCCTCTGGACCTTAGAAAAGTACCAAGCTCCAAATTCCCATGGGGGTATCCCTCCCCTCTGTGTAACCTTTGGTTCACCTTTAGTTGGGAATCACATATTTTCCCATGCCACAAGGCGAGAAGATTGGTCTAGATACTTCTTTCACTATGTCATGAGATATGACATTGTGCCACGAATCCTCTTTGCTCCCCTCTCTTCCCTAGACCAATCATTTGAACAAATTTCACAGTCTTTCAACCCCAGATCCAGGTCTTTCTTGAGTGAATCAGTGGGAAGATCAAGTTCAATATCAGATTTCTACTTTACCATAATGTCAAATGCTGCCATTGTCACAAGCCATGATGCTTCTAAGCTAATGTGCATCACAGATACCACATTGGAAACTCTGGAAAATTTTATTCCCTTAAGCCCTTACAGACCCTTTGGCACTTACATTTTCTGCACAGGAAATGGAAATTTAGGGAAGAAAATTGTGATAACAAACCCAAACGCAGTTCTCCAAGTCCTGTTTTTCTCTGCTCAATTAAGCACTGAAACAGAAGAGGCTCAAGTTGCTTACAGAAGCCTAAAAGAACATACAATTTATGGCACCGAACTGCAACAAATTGCAGCACAGAATTTTGTGCACTTAGATCAACAACAGCTTCAGAAGCTTCCTCTGTCTGAAGATGATGCCGGTGGCTCAAACGACCTTGATCTGAGCCCAAGAGCAAGACTGTGCCTTCGGGCAGCAGCAGAATCGGAGGAAAGAAAGTGTGAGAACGAGAAAAAGTTGAGGGAGAAGAGAAGTGTTATAGAGAAAAAGTTAAAGGAGATTGGGGAATACAAAGAAATGTGGGCGCACCAAAGAGTAGGTTTCTACGATGGATTCAGGGAGCATAAGAAAGCTGAAGACTTCAAAGCAAATGTGACGAGGCTAGAAATAGCAGGTGTGTGGGACGAGATCATTGAAAAGCTAAGAAATCACGAACTCCCAGATGAGTTTGAAGCGGATAGAGAATGGGTTGATCTTGGAACAAGGTGTCGGAAACTAGTGGAGCCTCTAGACATCGCTAATTACTACCGACATGGGAGACATTACGCGGATGATGCTTCTTCTTACATGGTTAAGGGAAGGCCAAAACGATATAGGTATCCTCAAAGATGGTTGGAACATGCTGAGAGAAGGCCACGAGAAGCTATCTCAATAACTTGCTTCTGGGCTGAGGTGGAAGAGCTTCGGTACAAAACTTGTAATGGTGATGTTTCAGATAGAGATGTTGAGGAAAGGGTTGTGCGTTTGGTGGGTCAGATAGAAGAATGGAGTAAGAAAAAAGAACTGGATAAGGATGTGTTCTTGGAGGGTTCGACCTTCGTGAAGTGGTGGAAAACTCTTCATCCACGACACAAGAACCAACCCTCCATTACAAGTCTTATCAGAGAGTGA 1818 0.434 MEMRGELIEKAYGGSLRAHKSPDRPYLIEKISRNDPSEVIISFPGSGAVRDWYSQRNFGETNIDLTLFPSLRSIGSDEPALVNETFLKRFQGIILLARPSLADEVEKAMRKKKQIVFAGHSSGGPMAILATLWTLEKYQAPNSHGGIPPLCVTFGSPLVGNHIFSHATRREDWSRYFFHYVMRYDIVPRILFAPLSSLDQSFEQISQSFNPRSRSFLSESVGRSSSISDFYFTIMSNAAIVTSHDASKLMCITDTTLETLENFIPLSPYRPFGTYIFCTGNGNLGKKIVITNPNAVLQVLFFSAQLSTETEEAQVAYRSLKEHTIYGTELQQIAAQNFVHLDQQQLQKLPLSEDDAGGSNDLDLSPRARLCLRAAAESEERKCENEKKLREKRSVIEKKLKEIGEYKEMWAHQRVGFYDGFREHKKAEDFKANVTRLEIAGVWDEIIEKLRNHELPDEFEADREWVDLGTRCRKLVEPLDIANYYRHGRHYADDASSYMVKGRPKRYRYPQRWLEHAERRPREAISITCFWAEVEELRYKTCNGDVSDRDVEERVVRLVGQIEEWSKKKELDKDVFLEGSTFVKWWKTLHPRHKNQPSITSLIRE 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01142 605 PANTHER PROTEIN EDS1-RELATED 2 604 IPR044214 GO:0006952
Vimu10g01142 605 Gene3D alpha/beta hydrolase 26 225 IPR029058 -
Vimu10g01142 605 Pfam Enhanced disease susceptibility 1 protein EP domain 401 594 IPR041266 -
Vimu10g01142 605 Pfam Lipase (class 3) 41 191 IPR002921 GO:0006629
Vimu10g01142 605 SUPERFAMILY alpha/beta-Hydrolases 33 194 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01142 Vimu-Chr10 11010685 11013321 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01142 86 191 Acyl Lipid Metabolism Gene Families AT3G07400 38.889 5.45e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01142 K18875 - gmx:100819703 899.042
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01142 10 11010685 11013321 Vimu10g01142 10 11010685 11013321 ECH