Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01141 ATGACTTTTTGGACCCCACCCAAGACTTCATCGTCACTTTGGTTTTTTTATTCTATTCCCATTTCCATAGAAACCAATAAGGCAAGAGCCAAACATCCAAAACTGCAAAAGTCTTCGTCAATTCGAACCGAAATTTCTGAAACTGCACACTGTCTTGCAGAAGAGGACAGCATGGCTGGAGGTTCGCTCGGAGACAACATAGGATTGAAGGAAGATGTCATCAAGAGGGTATGTGGTTTAGCCTTCAAAGCTCACAAGCACAAGACACAAGACAAGCTCTACTTTTACGAAAAGGTTCAAATTTCTTCCGGAACTTACCATGTTTTCAGCTTCTCAGGATCTTGGGATGCCACTGAATGGTTTGTTAACAAACCCTATGGAGAAACTAAGATAGATCTTACCCTGTTCCCTTCTCTCAGAAGTATTGGTAACGACGAAGCTGCTTTGGTGAACCAAGGCTTCGCAAAGAGATTCGACCACATATTCAAAGCCACCCCATTTAAATCCGAGGTAAATAAGGCTATAGGAGATGGGAAACAAGTGGTGTTTACGGGGCACTCCTCTGGTGCTGCTATGTCTGTATTTGCAACATTTTGGACCTTGGAAGAGTACCTTAATCCCACCAAAACTCAAAAACCTAAACCACCCTTCTGTGTCACTTTTGGGTCTCCCTTAATTGGTAATCATATACTCTCTCACGCTTCAAGGAGAGAAAACTGGTCTCGCTATTTCATACATTTTGTTTTGAGATATGACATAGTGCCACGGATTTTGCTTGCTCCCGTATCTTCTATTGAGCAAACTTTTGGTTCTATTTTCCAATTCTTGAATCCCAAGTTCAAAACTTCCATCCAAGATTCAACACAAGCAGCTGAATTTTTCTCATCTGTGATGAGAAACACAGCCAGTGTTACAAGCCATGCTGCGTGCATTCTCATGGGCAGCACAAATTTGTTACTTGAGACAGTGGCAAACTTTGTTGACTTGAGTCCTTATAGGCCCTTCGGAACATACATTTTCTGCAATGGAAATGGACAGTTGATTGTGGTGAAAAACTCTGATGCCGTTTTGCAACTGTTATTCCACACTGCTCAGCTAAGCGATTTGGCAGAACTTCCAAAAGTTGCCAAAGATAGCATATCGCAACACCTGTCCTATGAGGCTGAGTTGGAAGATAGCTTGGGAATGCAGAATATAGTATACCTGGAACAACTTGAGCAACTTCCCTTGTCTGCTGATGGTTCTGACAGTGATGTTGCAACAACTAGCGCAGCTTTGGATGGCCTTGGACTGAGCACAAGAGCAAGGTTGTGTCTACGAGCAGCAGGTGAGTTGCAAAAGCAGAAGCAGAAAAACGAGGAGAAGATCAATAAGGAGTTTGAGGATAAAGCTGTGGCGAGCATGAGGTATCTGGAGAACTACAAAACATCATGCGAGGTGCAAAAGGGGACAGGGTACTACGATGCTTTTAAGGTGCAGAAGGAGGAAAACGACTTCCAAGCAAATGTGAAGAGGCTAGTGCTGGCAGGGGTATGGGATGAGGTGATTGAGATGCTGAAGAGGTATGAACTCCCAGATGAGTTTGAAGGGAAGAAAGAATGGATTGAACGTGGAATCAACTTTCGTCGCCTTGTGGAGCCATTAGACATAGCCAACTACCATCGACATTTGAAGAACGAGGACACGGGACCTTACATGAGCAGGGCGAGGCCAAAACGATACAGATACACTCAAAGATGGTTGGAGCATGCGAAGAGGGAGCCAAAAGCTGTACCCATCACTGAATCCTCCTTCTGGGCTGAAGTGGAAGAGCTTCAAAGCTGGATCAATAGCAAGAAGGCTTTTGATGAAGTAAGGGAAAGGGTTGAGCAACTTCAACGTGACCTTAAAAAGTGGACTGATGAAAACGAACTCACTAAGGATACTTTCTCCAAGGACCCTAGCTTCATTACATTGTATGAAATTCTGCCTCCTGAAAACAAGGCAAACATAACTGCTCTTCTTGCCAACGTCAAACGATTTTAA 2025 0.4375 MTFWTPPKTSSSLWFFYSIPISIETNKARAKHPKLQKSSSIRTEISETAHCLAEEDSMAGGSLGDNIGLKEDVIKRVCGLAFKAHKHKTQDKLYFYEKVQISSGTYHVFSFSGSWDATEWFVNKPYGETKIDLTLFPSLRSIGNDEAALVNQGFAKRFDHIFKATPFKSEVNKAIGDGKQVVFTGHSSGAAMSVFATFWTLEEYLNPTKTQKPKPPFCVTFGSPLIGNHILSHASRRENWSRYFIHFVLRYDIVPRILLAPVSSIEQTFGSIFQFLNPKFKTSIQDSTQAAEFFSSVMRNTASVTSHAACILMGSTNLLLETVANFVDLSPYRPFGTYIFCNGNGQLIVVKNSDAVLQLLFHTAQLSDLAELPKVAKDSISQHLSYEAELEDSLGMQNIVYLEQLEQLPLSADGSDSDVATTSAALDGLGLSTRARLCLRAAGELQKQKQKNEEKINKEFEDKAVASMRYLENYKTSCEVQKGTGYYDAFKVQKEENDFQANVKRLVLAGVWDEVIEMLKRYELPDEFEGKKEWIERGINFRRLVEPLDIANYHRHLKNEDTGPYMSRARPKRYRYTQRWLEHAKREPKAVPITESSFWAEVEELQSWINSKKAFDEVRERVEQLQRDLKKWTDENELTKDTFSKDPSFITLYEILPPENKANITALLANVKRF 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01141 674 Gene3D alpha/beta hydrolase 27 310 IPR029058 -
Vimu10g01141 674 CDD Lipase_3 108 270 - -
Vimu10g01141 674 Coils Coil 615 642 - -
Vimu10g01141 674 SUPERFAMILY alpha/beta-Hydrolases 87 261 IPR029058 -
Vimu10g01141 674 Pfam Lipase (class 3) 108 257 IPR002921 GO:0006629
Vimu10g01141 674 PANTHER PROTEIN EDS1-RELATED 62 663 IPR044214 GO:0006952
Vimu10g01141 674 Pfam Enhanced disease susceptibility 1 protein EP domain 470 653 IPR041266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01141 Vimu-Chr10 11005914 11008608 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01141 136 248 Acyl Lipid Metabolism Gene Families AT5G14930 32.743 8.06e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01141 K18875 - gmx:100778851 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01141 10 11005914 11008608 Vimu10g01141 10 11005914 11008608 ECH