Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01132 GCTTTCAACCTGTTTGCTGAAATGAAGGGTGTTCTTTCCATCAGCTTCTTGTTTTGTTGCTTCCTGCTGCTCTTGGATTCTTCTATTTCACTCCCTCTGTGCGTTGATTCCAGAGCACCCTTGACCCTGAACAAGACACTTGAGTTTTGTCCTTATAATGGAAGCTCATGTTGCAACTCCACAGAAGATTCACAGATACAGAAGCAATTCCAAGTGAACAACGTATCTGATTCTGCCTGTGCCTCAGTTTTGAAATCAATACTCTGTGCGAGGTGCGACCCATTTTCAGCGGAGCTATTTACTGTTCAGTCCTCAGCTAGATCAGTTCCTGTGCTTTGCAATTCCACTGTCCCAGCAAATTCTTCTCAGTCAAAGACACAAGTGGAAGATTTCTGTTCTGAAGTATGGAACACATGCAAAGATGTACCCATAGTGAATTCTCCATTTTCCCCTTCATTACAAGGTCAAGCAGGAGCACCAGCTCACACCAATGCTACCAAACTCACTGATTTATGGCAGTCCAAAACAGACTTCTGCACTTCGTTTGGTGGATCATCTGATAATTCATCAGTGTGCTTTGAAGGAGAACCTGTTTCACTGAATAAAACTGAGACCTCTGTAACTCCCCCTCATGGCTTGTGCCTCGAGAAAATTGGTAATGGATCTTATCTCAACATGGTGGCTCATCCTGATGGCTCTAACCGAGCTTTCTTCTCTGACCAAAGGGGCAAGGTTTGGCTGGCAATACTTCCGGAAGAGGGATCGGGAAGAACATACGAGCTTGATGAATCAAGTCCTTTTGTTGATCTAACTGATCAAGTTTACTTTGATACTCAATTTGGAATGATGGGCATGGCGTTTCATCCAGATTTTGCTAAAAATGGACGATTCTTTGCTTCATTTACATGTGATAAGTCCAAGTGGTCAGGATGTAATGGAAGATGTTCTTGTAATTCAGATGTTAACTGTGACCCATCGAAGTTAGATACTGATCCTGGTGTCCAACCGTGCCAGTATCAAACTGTTATCGCAGAGTATTCTGCTAATAGCACTGGATCTGAGCCTTCCTCGGTGGAAAGTGCTAAACCAACTGAGGTGAGAAGAATATTTACCATGGGGCTCCCGTTTTCATCTCAACATGGTGGTCAAATACTCTTTGGACCCGATGATGGATATTTATACTTAATGATGGGATATGGAGGAAGTGTAGGTGATCCTTACAATTTTGCACAAAACAAGAAATCACTGCTTGGAAAGATTATGAGGTTTGATATCGACAACATCCCAAGTGCAGCAGAAATTACCAAACTTGGACTTTGGGGTAACTATTCCATTCCAAATGACAATCCATTTAGCGAAGATAATGATCTGCAGCCTGAAATATGGGCCTTAGGAATGAGGAATCCTTGGCGCTGCAGTTTTGATGCAGAAAGATCTTCCTACTTCTTGTGTGCAGATGTTGGACAGGATCTTTATGAGGAGGTGGATCTCATCACAAAGGGTGGAAACTATGGATGGCGTGTATACGAGGGCCCGTATCTGTACAACCCTCCAAAGTCACCCGGAGGAAATACTTCTGTAAATTCCATAAATCCAATTTTCCCAGTAATGGGATACCACCATTCTGAGTTAAACAAGAATGAAGGATCAGCTTCCATCACTGGAGGATATGTCTATCGATCTACCACTGATCCTTGCATGACCGGAAGGTACTTGTATGGAGATCTATACGCAGGTGCAATCTGGGCAGCCACAGAGAACCCAGAAAACAGTGGAAATTTCAGCAGCAGCAGAATTCCCTTCAGTTGTGCACATGATTCTCCTATACAGTGTCAGTCTACACCTGGAAACTCCCTTCCTGCTTTAGGCTACATCTTCTCATTTGGTGAAGACAACAACAAAGATGTTTATGTCCTTACAAGCACTGGTGTCTACCGAGTTGTTCGGCCAAGTCGTTGCAGTTATGGTTGCTCGCAGGAAAAGGCCACAACCACCACAACACCAACTCCTTCTCCTTCCCATGCTTCACGTTGGAGTCTCCTCCCTCAGTATCTGCTTTTGCAATGTTCATTTTTGTTGTTGATTTTGTTCCATTTTATGTAG 2103 0.4346 AFNLFAEMKGVLSISFLFCCFLLLLDSSISLPLCVDSRAPLTLNKTLEFCPYNGSSCCNSTEDSQIQKQFQVNNVSDSACASVLKSILCARCDPFSAELFTVQSSARSVPVLCNSTVPANSSQSKTQVEDFCSEVWNTCKDVPIVNSPFSPSLQGQAGAPAHTNATKLTDLWQSKTDFCTSFGGSSDNSSVCFEGEPVSLNKTETSVTPPHGLCLEKIGNGSYLNMVAHPDGSNRAFFSDQRGKVWLAILPEEGSGRTYELDESSPFVDLTDQVYFDTQFGMMGMAFHPDFAKNGRFFASFTCDKSKWSGCNGRCSCNSDVNCDPSKLDTDPGVQPCQYQTVIAEYSANSTGSEPSSVESAKPTEVRRIFTMGLPFSSQHGGQILFGPDDGYLYLMMGYGGSVGDPYNFAQNKKSLLGKIMRFDIDNIPSAAEITKLGLWGNYSIPNDNPFSEDNDLQPEIWALGMRNPWRCSFDAERSSYFLCADVGQDLYEEVDLITKGGNYGWRVYEGPYLYNPPKSPGGNTSVNSINPIFPVMGYHHSELNKNEGSASITGGYVYRSTTDPCMTGRYLYGDLYAGAIWAATENPENSGNFSSSRIPFSCAHDSPIQCQSTPGNSLPALGYIFSFGEDNNKDVYVLTSTGVYRVVRPSRCSYGCSQEKATTTTTPTPSPSHASRWSLLPQYLLLQCSFLLLILFHFM 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01132 700 Pfam Glucose / Sorbosone dehydrogenase 263 582 IPR012938 -
Vimu10g01132 700 Gene3D - 217 652 IPR011042 -
Vimu10g01132 700 FunFam HHIP-like 1 217 642 - -
Vimu10g01132 700 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 211 583 IPR011041 -
Vimu10g01132 700 PANTHER HEDGEHOG-INTERACTING PROTEIN 63 666 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01132 - - gmx:100778890 1231.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01132 10 10864191 10868174 Vimu10g01132 10 10864191 10868174 ECH