Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01103 ATGGATAGGGATAGCTTTGCTGGAAGGCATAATCCCACAAATGGTGTCCGGCTTGGACCTAGCTATGCTTCATGCCCATGTTCTTCTCATCAGCTTGTTTCTGAGTCTGACCTGAAAAGTTCTAGGATTTCACCATCAGTGTTATGGAAAAGTATTGCATCTGGCTCTAATTTAGATTGTCAAAACTGTCTTCACAGCAAATTTTGCAACAGGCCCAATCTGTTGGGTCTACCATCAATTAGTACTGATGATCCAAACTGCTGTGATCGTGGTCCATCATCAGCTGGCCATGAGCTTTGGAAGTATGTTAAGGATTCAGAATATGTGGAGACTAACAACAACATAAACCTGAATGTTATGCCTGTTGGTTCTTCTGAAACAAAAGCTGCAGAATTTCAAAGCATTCGGATAACAGTTGAATATGATAAATTTCAGGATTCAAGGTTGACTTGGCTTAAAGAAAAGCCTGCTGTACCCAAGGGAAACTCCACTGGTGAATGTGAAGCCTCAACTCCCATTGATTCTTCCTTTCTGAATCCTTCGAAATCTGGGTGTGTACATTCTGATTTGGAGTTGAATAAGGTTCAGAAAAGTCACTTGTGTGCATTCGACCTTAATGGAAAACCTCAGACATCCAAAGTCGTCCAGAGCCTGTCCACAGATCATAGGACTGAAGAAATTAATAAGATATCCAATGTAAATTTGCTTTCTGATGGTTATCCTGACATGGGCGAACAAGCATCTGTCAGTGAATACATGAAGAATGCAAAGAAGCACAAACATTCATCAGGTATTCTTGACCTAAATTCATGCACAAATGAAGATGAAAATATGCCAATTGATAATGATTTACAAGCTCCTGCAAGTCCAGAAAACAAGGAATGTTCTCCACCCAGAGGAGAATCTGATGAAAACCAGCCTGAGGTATTGCGCTTGGCAGGGCAGGAGCAGGAGCAGGAGGTTCCAGAAGCACGAGAAGAGCAAACCAGAATTGCAGCCGAGGCTTTGGTTTCCATATCAGAAGTTTTGACCTATGATGGTATCCAAATGACAAATTGCCCATCATCTGAACCTTCTATAACTAGTTCTCTCCACTGGTTTGCTGGAATTGTTTCTACAGTAGTCGATCATCCAGAGCATGAGGTTAAGGAGGATTTCAATTGTGCCATTAAGGATCTTGAGGACTTTCTGCCTGCTGACTTTGATTACTTTGAGTTCATGTCCTTAAATTTGTCTGACACCAAGGACCTATACAAGAGTAGTGGCCAAAATGAGCAAGAAGGTCTATCTACTTCACCAAGTAAACCAAGAAAGTGCCGAACAAACAGGAGGAGGCAGGGGAATGACTTCCAAAGTGACATTCTCCCAAGCCTGGCTTCTTTGTCTCGGTATGAGGTGACCGAAGATCTTCAAACCATAGGAGGTCTCGTGGAAGCTGCCAGAAAAATTCCCTCAGCATCAGGTTGCCTTAGAAGTGCCAGCAGAAATTTAGCAGCTCGGGGTAAGAGAAAGTCTTGTGGTTCATCCTCTAACATCACAGACTTGCTTTTGAACTTGAAGGAACTAAATATTGACACTGAAATTGCCATTGAGAAAATGGGGTACATAAGTTGGGGAAAGATTTGTAGAAAGCCAAGGGGAAAGAGATTTCCTATCAGTAAATCCCACTTAATATTTAGCCAAGTACATAACTAA 1695 0.4189 MDRDSFAGRHNPTNGVRLGPSYASCPCSSHQLVSESDLKSSRISPSVLWKSIASGSNLDCQNCLHSKFCNRPNLLGLPSISTDDPNCCDRGPSSAGHELWKYVKDSEYVETNNNINLNVMPVGSSETKAAEFQSIRITVEYDKFQDSRLTWLKEKPAVPKGNSTGECEASTPIDSSFLNPSKSGCVHSDLELNKVQKSHLCAFDLNGKPQTSKVVQSLSTDHRTEEINKISNVNLLSDGYPDMGEQASVSEYMKNAKKHKHSSGILDLNSCTNEDENMPIDNDLQAPASPENKECSPPRGESDENQPEVLRLAGQEQEQEVPEAREEQTRIAAEALVSISEVLTYDGIQMTNCPSSEPSITSSLHWFAGIVSTVVDHPEHEVKEDFNCAIKDLEDFLPADFDYFEFMSLNLSDTKDLYKSSGQNEQEGLSTSPSKPRKCRTNRRRQGNDFQSDILPSLASLSRYEVTEDLQTIGGLVEAARKIPSASGCLRSASRNLAARGKRKSCGSSSNITDLLLNLKELNIDTEIAIEKMGYISWGKICRKPRGKRFPISKSHLIFSQVHN 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01103 564 MobiDBLite consensus disorder prediction 419 448 - -
Vimu10g01103 564 Pfam Plant protein of unknown function (DUF863) 223 551 IPR008581 -
Vimu10g01103 564 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 81 551 - -
Vimu10g01103 564 MobiDBLite consensus disorder prediction 263 307 - -
Vimu10g01103 564 MobiDBLite consensus disorder prediction 419 436 - -
Vimu10g01103 564 MobiDBLite consensus disorder prediction 265 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01103 Vimu-Chr10 10504254 10505948 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01103 - - gmx:102666418 757.288