Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01068 ATGCCAAGGGTTTCGGCGAATCCTTCTTCCTCACGCTTATTCTCTGTGGCTTCCACCGTCAGAGCCTACGCGCTCCCTATTATTCTCTTCGCCGGAGCCATGTACTACCAGCTCTTCGTTATTCCCAATGCCTTCCCTCGTTCTCATTACGATGTTTTGCAAATTGAGAGCTATAGTTCTGTTGACAAAGTGCAGGAGGCTTACGAGAAGCTTGAATCTAAAATGAATTCTGCGGAGGAAGCTTTTGATATTCACGAGTTTTTAAAGATTCGATATGCTTATGAGTTGCTGACAAATCCTTTATGGAAAAGAGACTATGACATATTTGGTATTGACGAACAACTTCATATTGTTGAGAGTGCCAGCAAGCATTATGCAGGGAAACATATTTCAGAATTGGACTTCCCTTTACTACAGGCCCAATCTGGATCTATGGATCATTCTTCTAAAGTCATTACAGCTAGTGACTTCCAGTATATATTTCCAGATGTTAAGCCATGGCTAATGCAGCCTCAACAGTCATTTTCCCTATTTCAATCTCAGACACAATGGCATCAATTTTAG 564 0.4149 MPRVSANPSSSRLFSVASTVRAYALPIILFAGAMYYQLFVIPNAFPRSHYDVLQIESYSSVDKVQEAYEKLESKMNSAEEAFDIHEFLKIRYAYELLTNPLWKRDYDIFGIDEQLHIVESASKHYAGKHISELDFPLLQAQSGSMDHSSKVITASDFQYIFPDVKPWLMQPQQSFSLFQSQTQWHQF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01068 187 Gene3D DnaJ domain 46 111 IPR036869 -
Vimu10g01068 187 SUPERFAMILY Chaperone J-domain 38 110 IPR036869 -
Vimu10g01068 187 ProSiteProfiles dnaJ domain profile. 48 110 IPR001623 -
Vimu10g01068 187 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 16 22 185 - -
Vimu10g01068 187 Coils Coil 61 81 - -
Vimu10g01068 187 Pfam DnaJ domain 49 107 IPR001623 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01068 - - vra:106757965 335.109